PDB entry 1yef
View 1yef on RCSB PDB site
Description: structure of igg2a fab fragment (d2.3) complexed with substrate analogue
Class: catalytic antibody
Keywords: catalytic antibody
Deposited on
1997-05-29, released
1997-12-03
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.199
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: igg2a fab fragment
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1yefh1, d1yefh2 - Chain 'L':
Compound: igg2a fab fragment
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- PIR S16112 (0-218)
- conflict (1)
- conflict (6)
- conflict (9)
- conflict (11)
- conflict (13-14)
- conflict (16-17)
- conflict (23)
- conflict (26)
- conflict (26)
- conflict (34)
- conflict (38)
- conflict (40)
- conflict (43)
- conflict (50)
- conflict (53-54)
- conflict (57-59)
- conflict (66-67)
- conflict (85)
- conflict (91)
- conflict (93)
- conflict (98)
- conflict (107)
- conflict (111)
- conflict (113)
Domains in SCOPe 2.03: d1yefl1, d1yefl2 - Heterogens: ZN, PNC, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1yefH (H:)
emqlqqsgaellrpgtsvklscktsgyiftsywihwvkqrsgqglewiariypgtgstyy
nekfkgkatltadkssstaymqlstlksedsavyfctrwgfipvredyvmdywgqgtlvt
vssakttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavl
qsdlytlsssvtvtsstwpsqsitcnvahpasstkvdkkiep
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1yefL (L:)
divmtqspltlsvtigqpasisckssqsllysngktylnwllqrpgqspkrlihlvskld
sgvpdritgsgsgtdftlkisrveaadlgvyycvqgthfpytfgggtkleilrgdaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrnec