PDB entry 1yee

View 1yee on RCSB PDB site
Description: structure of a catalytic antibody, igg2a fab fragment (d2.5)
Class: catalytic antibody
Keywords: catalytic antibody, transition state analogue
Deposited on 1997-04-15, released 1997-10-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.204
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: igg2a fab fragment (d2.5)
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1yeeh1, d1yeeh2
  • Chain 'L':
    Compound: igg2a fab fragment (d2.5)
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PIR S16112 (0-218)
      • conflict (1)
      • conflict (6)
      • conflict (9)
      • conflict (11)
      • conflict (13-14)
      • conflict (16-17)
      • conflict (23)
      • conflict (26)
      • conflict (26)
      • conflict (34)
      • conflict (38)
      • conflict (40)
      • conflict (43)
      • conflict (50)
      • conflict (54)
      • conflict (57-59)
      • conflict (67)
      • conflict (85)
      • conflict (89)
      • conflict (91)
      • conflict (93)
      • conflict (98)
      • conflict (107)
      • conflict (111)
    Domains in SCOPe 2.06: d1yeel1, d1yeel2
  • Heterogens: PNB, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1yeeH (H:)
    evklqesgaelvrpgasvklscktsgyiftsywihwvkqraaaglewiariypgtgssyy
    nvkfkgkatltadkssstaymqlsslksddsavyfcvrwgfipvredyvldywgqgtlvt
    vssakttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavl
    qsdlytlsssvtvtsstwpsqsitcnvahpasstkvdkkiep
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1yeeL (L:)
    divmtqspltlsvtigqpasisckssqsllysngktylswllqrpgqspkrliylvskld
    sgvpdrftgsgsgtdftlkisrveaadlglyycvqgthfpytfgggtkleilradaaptv
    sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
    sstltltkdeyerhnsytceathktstspivksfnrnec