PDB entry 1ydw
View 1ydw on RCSB PDB site
Description: x-ray structure of gene product from arabidopsis thaliana at4g09670
Class: structural genomics, unknown function
Keywords: STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, Center for Eukaryotic Structural Genomics, CESG, AT4G09670, UNKNOWN FUNCTION
Deposited on
2004-12-26, released
2005-01-11
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.49 Å
R-factor: 0.218
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: AX110P-like protein
Species: Arabidopsis thaliana [TaxId:3702]
Gene: At4g09670
Database cross-references and differences (RAF-indexed):
- Uniprot Q9SZ83
- modified residue (11)
- modified residue (105)
- modified residue (125)
- modified residue (129)
- modified residue (248)
- modified residue (309)
Domains in SCOPe 2.06: d1ydwa1, d1ydwa2 - Chain 'B':
Compound: AX110P-like protein
Species: Arabidopsis thaliana [TaxId:3702]
Gene: At4g09670
Database cross-references and differences (RAF-indexed):
- Uniprot Q9SZ83
- modified residue (11)
- modified residue (105)
- modified residue (125)
- modified residue (129)
- modified residue (248)
- modified residue (309)
Domains in SCOPe 2.06: d1ydwb1, d1ydwb2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1ydwA (A:)
satetqirigvmgcadiarkvsraihlapnatisgvasrslekakafatannypestkih
gsyeslledpeidalyvplptslhvewaikaaekgkhillekpvamnvtefdkivdacea
ngvqimdgtmwvhnprtallkeflsdserfgqlktvqscfsfagdedflkndirvkpgld
glgalgdagwyairatllannfelpktvtafpgavlneagvilscgaslswedgrtatiy
csflanltmeitaigtkgtlrvhdfiipyketeasfttstkawfndlvtawvsppsehtv
ktelpqeacmvrefarlvgeiknngakpdgywpsisrktqlvvdavkesvdknyqqisls
gr
Sequence, based on observed residues (ATOM records): (download)
>1ydwA (A:)
qirigvmgcadiarkvsraihlapnatisgvasrslekakafatannypestkihgsyes
lledpeidalyvplptslhvewaikaaekgkhillekpvamnvtefdkivdaceangvqi
mdgtmwvhnprtallkeflsdserfgqlktvqscfsfagdedflkndirvkpgldglgal
gdagwyairatllannfelpktvtafpgavlneagvilscgaslswedgrtatiycsfla
nltmeitaigtkgtlrvhdfiipyketeasfttstkawfndlvtawvsppsehtvktelp
qeacmvrefarlvywpsisrktqlvvdavkesvdknyqqisls
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1ydwB (B:)
satetqirigvmgcadiarkvsraihlapnatisgvasrslekakafatannypestkih
gsyeslledpeidalyvplptslhvewaikaaekgkhillekpvamnvtefdkivdacea
ngvqimdgtmwvhnprtallkeflsdserfgqlktvqscfsfagdedflkndirvkpgld
glgalgdagwyairatllannfelpktvtafpgavlneagvilscgaslswedgrtatiy
csflanltmeitaigtkgtlrvhdfiipyketeasfttstkawfndlvtawvsppsehtv
ktelpqeacmvrefarlvgeiknngakpdgywpsisrktqlvvdavkesvdknyqqisls
gr
Sequence, based on observed residues (ATOM records): (download)
>1ydwB (B:)
qirigvmgcadiarkvsraihlapnatisgvasrslekakafatannypestkihgsyes
lledpeidalyvplptslhvewaikaaekgkhillekpvamnvtefdkivdaceangvqi
mdgtmwvhnprtallkeflsdserfgqlktvqscfsfagdedflkndirvkpgldglgal
gdagwyairatllannfelpktvtafpgavlneagvilscgaslswedgrtatiycsfla
nltmeitaigtkgtlrvhdfiipyketeasfttstkawfndlvtawvsppsehtvktelp
qeacmvrefaiknngakpdgywpsisrktqlvvdavkesvdknyqqisls