PDB entry 1ydp

View 1ydp on RCSB PDB site
Description: 1.9A crystal structure of HLA-G
Class: immune system
Keywords: immune system
Deposited on 2004-12-25, released 2005-03-08
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.235
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MHC class I antigen
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P17693 (0-274)
      • engineered (40)
    Domains in SCOPe 2.02: d1ydpa1, d1ydpa2
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1ydpb_
  • Chain 'P':
    Compound: histone 2a peptide
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 1YDP (0-8)
  • Heterogens: CO, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ydpA (A:)
    shsmryfsaavsrpgrgeprfiamgyvddtqfvrfdsdsasprmeprapwveqegpeywe
    eetrntkahaqtdrmnlqtlrgyynqseasshtlqwmigcdlgsdgrlirgyeryaydgk
    dylalnedlrswtaadtaaqiskrkceaanvaeqrraylegtcvewlhrylengkemlqr
    adppkthvthhpvfdyeatlrcwalgfypaeiiltwqrdgedqtqdvelvetrpagdgtf
    qkwaavvvpsgeeqrytchvqheglpeplmlrwkq
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ydpB (B:)
    miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
    wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
    

  • Chain 'P':
    No sequence available.