PDB entry 1y08
View 1y08 on RCSB PDB site
Description: Structure of the Streptococcal Endopeptidase IdeS, a Novel Cysteine Proteinase with Strict Specificity for IgG
Class: hydrolase
Keywords: cysteine proteinase, papain-like fold with major insertions, hydrolase
Deposited on
2004-11-15, released
2004-12-21
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.93 Å
R-factor: 0.196
AEROSPACI score: 0.47
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hypothetical protein SPy0861
Species: Streptococcus pyogenes [TaxId:1314]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1y08a_ - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1y08A (A:)
mgsshhhhhhssglvprgshmirysevtpyhvtsvwtkgvtppanftqgedvfhapyvan
qgwyditktfngkddllsgaatagnmlhwwfdqnkdqikryleehpekqkinfngeqmfd
vkeaidtknhqldsklfeyfkekafpylstkhlgvfpdhvidmfingyrlsltnhgptpv
kegskdprggifdavftrgdqsklltsrhdfkeknlkeisdlikkeltegkalglshtya
nvrinhvinlwgadfdsngnlkaiyvtdsdsnasigmkkyfvgvnsagkvaisakeiked
nigaqvlglftlstgqdswnqtn
Sequence, based on observed residues (ATOM records): (download)
>1y08A (A:)
tsvwtkgvtppanftqgedvfhapyvanqgwyditktfngkddllsgaatagnmlhwwfd
qnkdqikryleehpekqkinfngeqmfdvkeaidtknhqldsklfeyfkekafpylkhlg
vfpdhvidmfingyrlsltnhgptpvkegskdprggifdavftrgdqsklltsrhdfkek
nlkeisdlikkeltegkalglshtyrinhvinlwgadfdsngnlkaiyvtdsdsnasigm
kkyfvgvnsagkvaisakeikednigaqvlglftlstgqdswnqtn