PDB entry 1xo0

View 1xo0 on RCSB PDB site
Description: High resolution structure of the holliday junction intermediate in cre-loxp site-specific recombination
Class: hydrolase, ligase/DNA
Keywords: cre recombinase, holliday junction, recombination,complex (recombinase/DNA)
Deposited on 2004-10-05, released 2004-12-14
The last revision prior to the SCOP 1.75 freeze date was dated 2005-06-21, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.219
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Recombinase cre
    Species: Bacteriophage P1
    Gene: cre
    Database cross-references and differences (RAF-indexed):
    • Uniprot P06956 (0-End)
      • engineered (153)
    Domains in SCOP 1.75: d1xo0a1, d1xo0a2
  • Chain 'B':
    Compound: Recombinase cre
    Species: Bacteriophage P1
    Gene: cre
    Database cross-references and differences (RAF-indexed):
    • Uniprot P06956 (0-End)
      • engineered (153)
    Domains in SCOP 1.75: d1xo0b1, d1xo0b2
  • Chain 'C':
    Compound: loxp
  • Chain 'D':
    Compound: loxp
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1xo0A (A:)
sdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylq
arglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafer
tdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigr
tktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrkngvaapsatsqlstr
alegifeathrliygakddsgqrylawsghsarvgaardmaragvsipeimqaggwtnvn
ivmnyirnldsetgamvrlledgd

    Sequence, based on observed residues (ATOM records): (download) 
    >1xo0A (A:)
sdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylq
arglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafer
tdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigr
tktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrkngvaapsatsqlstr
alegifeathrliygakddsgqrylawsghsarvgaardmaragvsipeimqaggwtnvn
ivmnyirnldsetgamvrlled

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1xo0B (B:)
sdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylq
arglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafer
tdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigr
tktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrkngvaapsatsqlstr
alegifeathrliygakddsgqrylawsghsarvgaardmaragvsipeimqaggwtnvn
ivmnyirnldsetgamvrlledgd

    Sequence, based on observed residues (ATOM records): (download) 
    >1xo0B (B:)
sdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylq
arglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafer
tdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigr
tktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrkngvaapsatsqlstr
alegifeathrliygakddsgqrylawsghsarvgaardmaragvsipeimqaggwtnvn
ivmnyirnldsetgamvrlled

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.