PDB entry 1x23
View 1x23 on RCSB PDB site
Description: Crystal structure of ubch5c
Class: ligase
Keywords: Ubiquitin conjugating enzyme, Ubiquitin, E2
Deposited on
2005-04-19, released
2005-05-03
The last revision prior to the SCOP 1.73 freeze date was dated
2005-05-03, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.204
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin-conjugating enzyme E2 D3
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1x23a1 - Chain 'B':
Compound: Ubiquitin-conjugating enzyme E2 D3
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1x23b1 - Chain 'C':
Compound: Ubiquitin-conjugating enzyme E2 D3
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1x23c1 - Chain 'D':
Compound: Ubiquitin-conjugating enzyme E2 D3
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1x23d1 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1x23A (A:)
gplgspefmalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffl
tihfptdypfkppkvafttriyhpninsngsicldilrsqwspaltiskvllsicsllcd
pnpddplvpeiariyktdrdkynrisrewtqkyam
Sequence, based on observed residues (ATOM records): (download)
>1x23A (A:)
lgspefmalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvfflti
hfptdypfkppkvafttriyhpninsngsicldilrsqwspaltiskvllsicsllcdpn
pddplvpeiariyktdrdkynrisrewtqkyam
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1x23B (B:)
gplgspefmalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffl
tihfptdypfkppkvafttriyhpninsngsicldilrsqwspaltiskvllsicsllcd
pnpddplvpeiariyktdrdkynrisrewtqkyam
Sequence, based on observed residues (ATOM records): (download)
>1x23B (B:)
gspefmalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffltih
fptdypfkppkvafttriyhpninsngsicldilrsqwspaltiskvllsicsllcdpnp
ddplvpeiariyktdrdkynrisrewtqkyam
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1x23C (C:)
gplgspefmalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffl
tihfptdypfkppkvafttriyhpninsngsicldilrsqwspaltiskvllsicsllcd
pnpddplvpeiariyktdrdkynrisrewtqkyam
Sequence, based on observed residues (ATOM records): (download)
>1x23C (C:)
gspefmalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffltih
fptdypfkppkvafttriyhpninsngsicldilrsqwspaltiskvllsicsllcdpnp
ddplvpeiariyktdrdkynrisrewtqkyam
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1x23D (D:)
gplgspefmalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffl
tihfptdypfkppkvafttriyhpninsngsicldilrsqwspaltiskvllsicsllcd
pnpddplvpeiariyktdrdkynrisrewtqkyam
Sequence, based on observed residues (ATOM records): (download)
>1x23D (D:)
plgspefmalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvfflt
ihfptdypfkppkvafttriyhpninsngsicldilrsqwspaltiskvllsicsllcdp
npddplvpeiariyktdrdkynrisrewtqkyam