PDB entry 1wda

View 1wda on RCSB PDB site
Description: Crystal structure of human peptidylarginine deiminase type4 (PAD4) in complex with benzoyl-L-arginine amide
Class: Hydrolase
Keywords: Post-translational enzyme, Hydrolase
Deposited on 2004-05-12, released 2004-07-13
The last revision prior to the SCOPe 2.02 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.215
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein-arginine deiminase type IV
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UM07 (Start-669)
      • engineered (651)
    Domains in SCOPe 2.02: d1wdaa1, d1wdaa2, d1wdaa3
  • Heterogens: CA, SO4, BAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1wdaA (A:)
    gplgspqmaqgtlirvtpeqpthavcvlgtltqldicssapedctsfsinaspgvvvdia
    hsppakkkstgsstwpldpgvevtltmkaasgstgdqkvqisyygpktppvkallyltav
    eislcaditrtgkvkptravkdqrtwtwgpcgqgaillvncdrdnlessamdceddevld
    sedlqdmslmtlstktpkdfftnhtlvlhvarsemdkvrvfqatrgklsskcsvvlgpkw
    pshylmvpggkhnmdfyvealafpdtdfpglitltislldtsnlelpeavvfqdsvvfrv
    apwimtpntqppqevyacsifenedflksvttlamkakcklticpeeenmddqwmqdeme
    igyiqaphktlpvvfdsprnrglkefpikrvmgpdfgyvtrgpqtggisgldsfgnlevs
    ppvtvrgkeyplgrilfgdscypsndsrqmhqalqdflsaqqvqapvklysdwlsvghvd
    eflsfvpapdrkgfrlllasprscyklfqeqqneghgeallfegikkkkqqkiknilsnk
    tlrehnsfvercidwnrellkrelglaesdiidipqlfklkefskaeaffpnmvnmlvlg
    khlgipkpfgpvingrccleekvcslleplglqctfindfftyhirhgevhagtnvrrkp
    fsfkwwnmvp
    

    Sequence, based on observed residues (ATOM records): (download)
    >1wdaA (A:)
    gtlirvtpeqpthavcvlgtltqldicssapetsfsinaspgvvvditwpldpgvevtlt
    mkaasgstgdqkvqisyygpktppvkallyltaveislcaditrtgkqrtwtwgpcgqga
    illvncdrdnlessamdceddevldsedlqdmslmtlstktpkdfftnhtlvlhvarsem
    dkvrvfqatcsvvlgpkwpshylmvpggkhnmdfyvealafpdtdfpglitltislldts
    nlelpeavvfqdsvvfrvapwimtpntqppqevyacsifenedflksvttlamkakcklt
    icpeeenmddqwmqdemeigyiqaphktlpvvfdsprnrglkefpikrvmgpdfgyvtrg
    pqtggisgldsfgnlevsppvtvrgkeyplgrilfgdscypsndsrqmhqalqdflsaqq
    vqapvklysdwlsvghvdeflsfvpapdrkgfrlllasprscyklfqeqqneghgeallf
    egikkkkqqkiknilsnktlrehnsfvercidwnrellkrelglaesdiidipqlfklke
    fskaeaffpnmvnmlvlgkhlgipkpfgpvingrccleekvcslleplglqctfindfft
    yhirhgevhagtnvrrkpfsfkwwnmvp