PDB entry 1wd9

View 1wd9 on RCSB PDB site
Description: Calcium bound form of human peptidylarginine deiminase type4 (PAD4)
Class: Hydrolase
Keywords: Post-translational enzyme, Hydrolase
Deposited on 2004-05-12, released 2004-07-13
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.228
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein-arginine deiminase type IV
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UM07 (Start-669)
      • engineered (651)
    Domains in SCOPe 2.03: d1wd9a1, d1wd9a2, d1wd9a3
  • Heterogens: CA, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1wd9A (A:)
    gplgspqmaqgtlirvtpeqpthavcvlgtltqldicssapedctsfsinaspgvvvdia
    hsppakkkstgsstwpldpgvevtltmkaasgstgdqkvqisyygpktppvkallyltav
    eislcaditrtgkvkptravkdqrtwtwgpcgqgaillvncdrdnlessamdceddevld
    sedlqdmslmtlstktpkdfftnhtlvlhvarsemdkvrvfqatrgklsskcsvvlgpkw
    pshylmvpggkhnmdfyvealafpdtdfpglitltislldtsnlelpeavvfqdsvvfrv
    apwimtpntqppqevyacsifenedflksvttlamkakcklticpeeenmddqwmqdeme
    igyiqaphktlpvvfdsprnrglkefpikrvmgpdfgyvtrgpqtggisgldsfgnlevs
    ppvtvrgkeyplgrilfgdscypsndsrqmhqalqdflsaqqvqapvklysdwlsvghvd
    eflsfvpapdrkgfrlllasprscyklfqeqqneghgeallfegikkkkqqkiknilsnk
    tlrehnsfvercidwnrellkrelglaesdiidipqlfklkefskaeaffpnmvnmlvlg
    khlgipkpfgpvingrccleekvcslleplglqctfindfftyhirhgevhagtnvrrkp
    fsfkwwnmvp
    

    Sequence, based on observed residues (ATOM records): (download)
    >1wd9A (A:)
    gtlirvtpeqpthavcvlgtltqldicssasfsinaspgvvvdiawpldpgvevtltmka
    asgstgdqkvqisyyktppvkallyltaveislcaditrtqrtwtwgpcgqgaillvncd
    rdnlessamdceddevldsedlqdmslmtlstktpkdfftnhtlvlhvarsemdkvrvfq
    atcsvvlgpkwpshylmvpggkhnmdfyvealafpdtdfpglitltislldtsnlelpea
    vvfqdsvvfrvapwimtpntqppqevyacsedflksvttlamkakcklticpqwmqdeme
    igyiqaphktlpvvfdsprnrglkefpikrvmgpdfgyvtrgpqtggisgldsfgnlevs
    ppvtvrgkeyplgrilfgdscypsndsrqmhqalqdflsaqqvqapvklysdwlsvghvd
    eflsfvpapdrkgfrlllasprscyklfqeqqneghgeallfqqkiknilsnktlrehns
    fvercidwnrellkrelglaesdiidipqlfklkefskaeaffpnmvnmlvlgkhlgipk
    pfgpvingrccleekvcslleplglqctfindfftyhirhgevhagtnvrrkpfsfkwwn
    mvp