PDB entry 1wc7
View 1wc7 on RCSB PDB site
Description: fab fragment of plp-dependent catalytic antibody 15a9 in complex with phosphopyridoxyl-l-alanine
Class: antibody
Keywords: antibody, catalytic antibody, transamination, pyridoxal-phosphate, phosphopyridoxyl-l-alanine
Deposited on
2004-11-09, released
2005-11-30
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.33 Å
R-factor: 0.2234
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: fab fragment of catalytic antibody 15a9, light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1wc7a1, d1wc7a2 - Chain 'B':
Compound: fab fragment of catalytic antibody 15a9, heavy chain
Species: Mus musculus [TaxId:10090]
Domains in SCOPe 2.06: d1wc7b1, d1wc7b2 - Chain 'H':
Compound: fab fragment of catalytic antibody 15a9, heavy chain
Species: Mus musculus [TaxId:10090]
Domains in SCOPe 2.06: d1wc7h1, d1wc7h2 - Chain 'L':
Compound: fab fragment of catalytic antibody 15a9, light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1wc7l1, d1wc7l2 - Heterogens: IOD, PP3, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1wc7A (A:)
dieltqspaimaaspgekvtitcsatsgvnymhwfqqkpgtspklwiystsnlasavpar
fsgsgsgtsysltisrmeaedaatyycqqrstypftfgggtklelkradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrnec
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1wc7B (B:)
evklqesggglvqpghslrlscatsgftftdyymswvrqppgkalewlglirnkangytk
eysasvkgrftisrdnsqsilylqmnalraedsatyycvrdkgsygnyeawfaywgqgtt
vtvssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpa
vlqsdlytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd
Sequence, based on observed residues (ATOM records): (download)
>1wc7B (B:)
evklqesggglvqpghslrlscatsgftftdyymswvrqppgkalewlglirnkangytk
eysasvkgrftisrdnsqsilylqmnalraedsatyycvrdkgsygnyeawfaywgqgtt
vtvssakttppsvyplapgsqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavl
qsdlytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd
- Chain 'H':
Sequence, based on SEQRES records: (download)
>1wc7H (H:)
evklqesggglvqpghslrlscatsgftftdyymswvrqppgkalewlglirnkangytk
eysasvkgrftisrdnsqsilylqmnalraedsatyycvrdkgsygnyeawfaywgqgtt
vtvssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpa
vlqsdlytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd
Sequence, based on observed residues (ATOM records): (download)
>1wc7H (H:)
evklqesggglvqpghslrlscatsgftftdyymswvrqppgkalewlglirnkangytk
eysasvkgrftisrdnsqsilylqmnalraedsatyycvrdkgsygnyeawfaywgqgtt
vtvssakttppsvyplapgsqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavl
qsdlytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd
- Chain 'L':
Sequence, based on SEQRES records: (download)
>1wc7L (L:)
dieltqspaimaaspgekvtitcsatsgvnymhwfqqkpgtspklwiystsnlasavpar
fsgsgsgtsysltisrmeaedaatyycqqrstypftfgggtklelkradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>1wc7L (L:)
dieltqspaimaaspgekvtitcsatsgvnymhwfqqkpgtspklwiystsnlasavpar
fsgsgsgtsysltisrmeaedaatyycqqrstypftfgggtklelkradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrne