PDB entry 1wbd

View 1wbd on RCSB PDB site
Description: crystal structure of e. coli DNA mismatch repair enzyme muts, e38q mutant, in complex with a g.t mismatch
Class: DNA BINDING protein/DNA
Keywords: ATP-binding, complete proteome, DNA binding, DNA repair, mismatch recognition
Deposited on 2004-10-31, released 2006-01-18
The last revision prior to the SCOP 1.75 freeze date was dated 2006-01-30, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.213
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA mismatch repair protein muts
    Species: Escherichia coli
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23909 (Start-799)
      • engineered mutation (37)
    Domains in SCOP 1.75: d1wbda1, d1wbda2, d1wbda3, d1wbda4
  • Chain 'B':
    Compound: DNA mismatch repair protein muts
    Species: Escherichia coli
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23909 (Start-799)
      • engineered mutation (37)
  • Chain 'E':
    Compound: 5'-d(*ap*gp*cp*tp*gp*cp*cp*ap*gp*gp *cp*ap*cp*cp*ap*gp*tp*g)-3'
  • Chain 'F':
    Compound: 5'-d(*ap*cp*tp*gp*gp*tp*gp*cp*tp*tp *gp*gp*cp*ap*gp*cp*t)-3'
  • Heterogens: MG, ADP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1wbdA (A:)
msaienfdahtpmmqqylrlkaqhpeillfyrmgdfyqlfyddakrasqlldisltkrga
sagepipmagipyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtis
deallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaelly
aedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcl
lqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvt
pmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrta
rprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvr
dggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrg
qshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphle
alqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianp
lnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgaa
ddlasgrstfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankik
altlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalag
vpkevikrarqklrelesis

    Sequence, based on observed residues (ATOM records): (download) 
    >1wbdA (A:)
saienfdahtpmmqqylrlkaqhpeillfyrmgdfyqlfyddakrasqlldisltkrgas
agepipmagipyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisd
eallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellya
edfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcll
qyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtp
mgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtar
prdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrd
ggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgq
shlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlea
lqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianpl
nlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmv
emtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfel
tqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqk
lrelesis

  • Chain 'B':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.