PDB entry 1vpy

View 1vpy on RCSB PDB site
Description: Crystal structure of a TIM alpha/beta barrel protein with unknown function (ef0366) from Enterococcus faecalis v583 at 2.52 A resolution
Class: structural genomics, unknown function
Keywords: ef0366, HYPOTHETICAL PROTEIN, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI
Deposited on 2004-11-23, released 2004-12-07
The last revision prior to the SCOP 1.75 freeze date was dated 2004-12-07, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.52 Å
R-factor: 0.227
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PROTEIN (hypothetical protein EF0366)
    Species: Enterococcus faecalis
    Gene: ef0366
    Database cross-references and differences (RAF-indexed):
    • GB NP_814157 (12-End)
      • leader sequence (8-11)
      • modified residue (12)
      • modified residue (46)
      • modified residue (74)
      • modified residue (96)
      • modified residue (104)
      • modified residue (164)
      • modified residue (168)
      • modified residue (243)
      • modified residue (269)
    Domains in SCOP 1.75: d1vpya_
  • Heterogens: ZN, UNL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vpyA (A:)
mgsdkihhhhhhmirlgltsfsehdyltgkkrstlyeyashlplvemdtayygippkerv
aewvkavpenfrfvmkvysgiscqgewqtyyaseeemitaflesmaplieskklfaflvq
fsgtfgctkenvaylqkirhwfkdlpiaielrnnswyqpnfvkqmlqfmkenqfslvivd
epqiptnpvpfypyvtnpnlvlfrfhgrnaagwlandaewrkkrtlyhyntqeiadlsea
vlkmsqeakevgvifnnnsggdaaenalqmqkvlnlsyddlnpkqldlf

    Sequence, based on observed residues (ATOM records): (download) 
    >1vpyA (A:)
hhhhmirlgltsfsstlyeyashlplvemdtayygippkervaewvkavpenfrfvmkvy
sgiscqgewqtyyaseeemitaflesmaplieskklfaflvqfsgtfgctkenvaylqki
rhwfkdlpiaielrnnswyqpnfvkqmlqfmkenqfslvivdepqiptnpvpfypyvtnp
nlvlfrfhgrnaagwkkrtlyhyntqeiadlseavlkmsqeakevgvifnnnsggdaaen
alqmqkvlnls