PDB entry 1vi5

View 1vi5 on RCSB PDB site
Description: Crystal structure of ribosomal protein S2P
Class: ribosome
Keywords: structural genomics
Deposited on 2003-12-01, released 2003-12-30
The last revision prior to the SCOP 1.75 freeze date was dated 2005-08-30, with a file datestamp of 2007-07-20.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: 0.246
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 30S ribosomal protein S2P
    Species: Archaeoglobus fulgidus
    Gene: RPS2P, AF1133
    Database cross-references and differences (RAF-indexed):
    • Uniprot O29132 (Start-197)
      • modified residue (31)
      • modified residue (85)
      • modified residue (108)
      • cloning artifact (198-202)
    Domains in SCOP 1.75: d1vi5a_
  • Chain 'B':
    Compound: 30S ribosomal protein S2P
    Species: Archaeoglobus fulgidus
    Gene: RPS2P, AF1133
    Database cross-references and differences (RAF-indexed):
    • Uniprot O29132 (Start-197)
      • modified residue (31)
      • modified residue (85)
      • modified residue (108)
      • cloning artifact (198)
    Domains in SCOP 1.75: d1vi5b_
  • Chain 'C':
    Compound: 30S ribosomal protein S2P
    Species: Archaeoglobus fulgidus
    Gene: RPS2P, AF1133
    Database cross-references and differences (RAF-indexed):
    • Uniprot O29132 (Start-197)
      • modified residue (31)
      • modified residue (85)
      • modified residue (108)
      • cloning artifact (198)
    Domains in SCOP 1.75: d1vi5c_
  • Chain 'D':
    Compound: 30S ribosomal protein S2P
    Species: Archaeoglobus fulgidus
    Gene: RPS2P, AF1133
    Database cross-references and differences (RAF-indexed):
    • Uniprot O29132 (Start-197)
      • modified residue (31)
      • modified residue (85)
      • modified residue (108)
    Domains in SCOP 1.75: d1vi5d_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vi5A (A:)
mslekeyeylvppddylaagvhigtqiktgdmkkfifkvrqdglyvldirklderirvaa
kflsryepskillvaarqyahkpvqmfskvvgsdyivgrfipgtltnpmlseyrepevvf
vndpaidkqavseatavgipvvalcdsnnssadvdlviptnnkgrralaivywllareia
kirgqdftysiedfeaeleggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vi5A (A:)
eyeylvppddylaagvhigtqiktgdmkkfifkvrqdglyvldirklderirvaakflsr
yepskillvaarqyahkpvqmfskvvgsdyivgrfipgtltnpmlseyrepevvfvndpa
idkqavseatavgipvvalcdsnnssadvdlviptnnkgrralaivywllareiakirgq
dftysiedfeaeleggsh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1vi5B (B:)
mslekeyeylvppddylaagvhigtqiktgdmkkfifkvrqdglyvldirklderirvaa
kflsryepskillvaarqyahkpvqmfskvvgsdyivgrfipgtltnpmlseyrepevvf
vndpaidkqavseatavgipvvalcdsnnssadvdlviptnnkgrralaivywllareia
kirgqdftysiedfeaeleggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vi5B (B:)
keyeylvppddylaagvhigtqiktgdmkkfifkvrqdglyvldirklderirvaakfls
ryepskillvaarqyahkpvqmfskvvgsdyivgrfipgtltnpmlseyrepevvfvndp
aidkqavseatavgipvvalcdsnnssadvdlviptnnkgrralaivywllareiakirg
qdftysiedfeaele

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1vi5C (C:)
mslekeyeylvppddylaagvhigtqiktgdmkkfifkvrqdglyvldirklderirvaa
kflsryepskillvaarqyahkpvqmfskvvgsdyivgrfipgtltnpmlseyrepevvf
vndpaidkqavseatavgipvvalcdsnnssadvdlviptnnkgrralaivywllareia
kirgqdftysiedfeaeleggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vi5C (C:)
yeylvppddylaagvhigtqiktgdmkkfifkvrqdglyvldirklderirvaakflsry
epskillvaarqyahkpvqmfskvvgsdyivgrfipgtltnpmlseyrepevvfvndpai
dkqavseatavgipvvalcdsnnssadvdlviptnnkgrralaivywllareiakirgqd
ftysiedfeaele

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1vi5D (D:)
mslekeyeylvppddylaagvhigtqiktgdmkkfifkvrqdglyvldirklderirvaa
kflsryepskillvaarqyahkpvqmfskvvgsdyivgrfipgtltnpmlseyrepevvf
vndpaidkqavseatavgipvvalcdsnnssadvdlviptnnkgrralaivywllareia
kirgqdftysiedfeaeleggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vi5D (D:)
yeylvppddylaagvhigtqiktgdmkkfifkvrqdglyvldirklderirvaakflsry
epskillvaarqyahkpvqmfskvvgsdyivgrfipgtltnpmlseyrepevvfvndpai
dkqavseatavgipvvalcdsnnssadvdlviptnnkgrralaivywllareiakirgqd
ftysiedfeael