PDB entry 1vge

View 1vge on RCSB PDB site
Description: tr1.9 fab fragment of a human igg1 kappa autoantibody
Class: immunoglobulin
Keywords: tr1.9, anti-thyroid peroxidase, autoantibody, immunoglobulin
Deposited on 1996-01-04, released 1996-06-10
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.18
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'H':
  Compound: tr1.9 fab
  Species: Homo sapiens [TaxId:9606]
  Gene: CDNA DERIVED FROM
  Database cross-references and differences (RAF-indexed):
  • Uniprot P01857 (122-224)
  Domains in SCOPe 2.05: d1vgeh1, d1vgeh2
• Chain 'L':
  Compound: tr1.9 fab
  Species: Homo sapiens [TaxId:9606]
  Gene: CDNA DERIVED FROM
  Database cross-references and differences (RAF-indexed):
  • EMBL CAA65058 (0-211)
    • insertion (2-3)
    • conflict (10)
    • conflict (19)
    • conflict (21)
    • conflict (31)
    • conflict (44)
    • conflict (49)
    • conflict (52)
    • conflict (54)
    • conflict (71)
    • conflict (82)
    • conflict (84)
    • conflict (90)
    • conflict (93)
    • conflict (95)
    • conflict (99)
    • conflict (190)
  Domains in SCOPe 2.05: d1vgel1, d1vgel2
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'H':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1vgeH (H:)
  qvklleqsgaevkkpgasvkvsckasgysftsyglhwvrqapgqrlewmgwisagtgntk
  ysqkfrgrvtftrdtsattaymglsslrpedtavyycardpygggksefdywgqgtlvtv
  ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
  ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc
  

  
  
• Chain 'L':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1vgeL (L:)
  elvmtqspsslsasvgdrvniacrasqgissalawyqqkpgkaprlliydasnlesgvps
  rfsgsgsgtdftltisslqpedfaiyycqqfnsypltfgggtkveikrtvaapsvfifpp
  sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
  lskadyekhkvyacevthqglsspvtksfnrgec