SCOP 1.69: Structural Classification of Proteins — extended

PDB entry 1vg9

View 1vg9 on RCSB PDB site
Description: the crystal structures of the rep-1 protein in complex with c- terminally truncated rab7 protein
Deposited on 2004-04-23, released 2004-07-20
The last revision prior to the SCOP 1.69 freeze date was dated 2004-07-20, with a file datestamp of 2004-07-20.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.206
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Domains in SCOP 1.69: d1vg9a1, d1vg9a2
Chain 'B':
Domains in SCOP 1.69: d1vg9b_
Chain 'C':
Domains in SCOP 1.69: d1vg9c1, d1vg9c2
Chain 'D':
Domains in SCOP 1.69: d1vg9d_
Chain 'E':
Domains in SCOP 1.69: d1vg9e1, d1vg9e2
Chain 'F':
Domains in SCOP 1.69: d1vg9f_
Chain 'G':
Domains in SCOP 1.69: d1vg9g1, d1vg9g2
Chain 'H':
Domains in SCOP 1.69: d1vg9h_

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1vg9A (A:)
madnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlk
eyqenndvvtensmwqeqileneeaiplsskdktiqhvevfcyasqdlhkdveeagalqk
nhasvtsaqsaeaaeaaetsclptaveplsmgsceipaeqsqcpgpesspevndaeatgk
kensdakssteepsenvpkvqdntetpkknritysqiikegrrfnidlvskllysrglli
dlliksnvsryaefknitrilafregtveqvpcsradvfnskqltmvekrmlmkfltfcv
eyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtsettsctvdglkatkkflq
clgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclvvdkesrkckavidqf
gqriiskhfiiedsylsentcsrvqyrqisravlitdgsvlrtdadqqvsiltvpaeepg
sfavrvielcsstmtcmkgtylvhltcmssktaredlervvqklftpyteieaeneqvek
prllwalyfnmrdssdisrdcyndlpsnvyvcsgpdsglgndnavkqaetlfqqicpned
fcpappnpedivldgdssqqevpessvtpetnsetpkestvlgnpeepse

Sequence, based on observed residues (ATOM records): (download)

>1vg9A (A:)
adnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlke
yqmwqeqileneeaiplsskdktiqhvevfcyasqdnritysqiikegrrfnidlvskll
ysrgllidlliksnvsryaefknitrilafregtveqvpcsradvfnskqltmvekrmlm
kfltfcveyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtsettsctvdglk
atkkflqclgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclvvdkesrkc
kavidqfgqriiskhfiiedsylsentcsrvqyrqisravlitdgsvlrtdadqqvsilt
vpaeepgsfavrvielcsstmtcmkgtylvhltcmssktaredlervvqklftpyteiea
eneqvekprllwalyfnmrdssdisrdcyndlpsnvyvcsgpdsglgndnavkqaetlfq
qicpnedfcpappnpedivld

Chain 'B':
Sequence, based on SEQRES records: (download)

>1vg9B (B:)
mtsrkkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmq
iwdtagqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpf
vvlgnkidlenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
elyne

Sequence, based on observed residues (ATOM records): (download)

>1vg9B (B:)
kvllkviilgdsgvgktslmnqyvnkkfsnigadfltkevmvddrlvtmqiwdtagqerf
qslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlgnkidle
nrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqete

Chain 'C':
Sequence, based on SEQRES records: (download)

>1vg9C (C:)
madnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlk
eyqenndvvtensmwqeqileneeaiplsskdktiqhvevfcyasqdlhkdveeagalqk
nhasvtsaqsaeaaeaaetsclptaveplsmgsceipaeqsqcpgpesspevndaeatgk
kensdakssteepsenvpkvqdntetpkknritysqiikegrrfnidlvskllysrglli
dlliksnvsryaefknitrilafregtveqvpcsradvfnskqltmvekrmlmkfltfcv
eyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtsettsctvdglkatkkflq
clgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclvvdkesrkckavidqf
gqriiskhfiiedsylsentcsrvqyrqisravlitdgsvlrtdadqqvsiltvpaeepg
sfavrvielcsstmtcmkgtylvhltcmssktaredlervvqklftpyteieaeneqvek
prllwalyfnmrdssdisrdcyndlpsnvyvcsgpdsglgndnavkqaetlfqqicpned
fcpappnpedivldgdssqqevpessvtpetnsetpkestvlgnpeepse

Sequence, based on observed residues (ATOM records): (download)

>1vg9C (C:)
dnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlkey
qenndvvtensmwqeqileneeaiplsskdktiqhvevfcyasqdritysqiikegrrfn
idlvskllysrgllidlliksnvsryaefknitrilafregtveqvpcsradvfnskqlt
mvekrmlmkfltfcveyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtsett
sctvdglkatkkflqclgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclv
vdkesrkckavidqfgqriiskhfiiedsylsentcsrvqyrqisravlitdgsvlrtda
dqqvsiltvpaeepgsfavrvielcsstmtcmkgtylvhltcmssktaredlervvqklf
tpyteekprllwalyfnmrdssdisrdcyndlpsnvyvcsgpdsglgndnavkqaetlfq
qicpnedfcpappnpedivldg

Chain 'D':
Sequence, based on SEQRES records: (download)

>1vg9D (D:)
mtsrkkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmq
iwdtagqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpf
vvlgnkidlenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
elyne

Sequence, based on observed residues (ATOM records): (download)

>1vg9D (D:)
kvllkviilgdsgvgktslmnqyvnkkfsnqyigadfltkevmvddrlvtmqiwdtagqe
rfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlgnkid
lenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqeteve

Chain 'E':
Sequence, based on SEQRES records: (download)

>1vg9E (E:)
madnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlk
eyqenndvvtensmwqeqileneeaiplsskdktiqhvevfcyasqdlhkdveeagalqk
nhasvtsaqsaeaaeaaetsclptaveplsmgsceipaeqsqcpgpesspevndaeatgk
kensdakssteepsenvpkvqdntetpkknritysqiikegrrfnidlvskllysrglli
dlliksnvsryaefknitrilafregtveqvpcsradvfnskqltmvekrmlmkfltfcv
eyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtsettsctvdglkatkkflq
clgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclvvdkesrkckavidqf
gqriiskhfiiedsylsentcsrvqyrqisravlitdgsvlrtdadqqvsiltvpaeepg
sfavrvielcsstmtcmkgtylvhltcmssktaredlervvqklftpyteieaeneqvek
prllwalyfnmrdssdisrdcyndlpsnvyvcsgpdsglgndnavkqaetlfqqicpned
fcpappnpedivldgdssqqevpessvtpetnsetpkestvlgnpeepse

Sequence, based on observed residues (ATOM records): (download)

>1vg9E (E:)
dnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlkey
qmwqeqileneeaiplsskdktiqhvevfcyasqdnritysqiikegrrfnidlvsklly
srgllidlliksnvsryaefknitrilafregtveqvpcsradvfnskqltmvekrmlmk
fltfcveyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtsettsctvdglka
tkkflqclgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclvvdkesrkck
avidqfgqriiskhfiiedsylsentcsrvqyrqisravlitdgsvlrtdadqqvsiltv
paeepgsfavrvielcsstmtcmkgtylvhltcmssktaredlervvqklftpyteieae
neqvekprllwalyfnmrdssdisrdcyndlpsnvyvcsgpdsglgndnavkqaetlfqq
icpnedfcpappnpedivld

Chain 'F':
Sequence, based on SEQRES records: (download)

>1vg9F (F:)
mtsrkkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmq
iwdtagqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpf
vvlgnkidlenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
elyne

Sequence, based on observed residues (ATOM records): (download)

>1vg9F (F:)
kvllkviilgdsgvgktslmnqyvnkkfsnigadfltkevmvddrlvtmqiwdtagqerf
qslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlgnkidle
nrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqet

Chain 'G':
Sequence, based on SEQRES records: (download)

>1vg9G (G:)
madnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlk
eyqenndvvtensmwqeqileneeaiplsskdktiqhvevfcyasqdlhkdveeagalqk
nhasvtsaqsaeaaeaaetsclptaveplsmgsceipaeqsqcpgpesspevndaeatgk
kensdakssteepsenvpkvqdntetpkknritysqiikegrrfnidlvskllysrglli
dlliksnvsryaefknitrilafregtveqvpcsradvfnskqltmvekrmlmkfltfcv
eyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtsettsctvdglkatkkflq
clgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclvvdkesrkckavidqf
gqriiskhfiiedsylsentcsrvqyrqisravlitdgsvlrtdadqqvsiltvpaeepg
sfavrvielcsstmtcmkgtylvhltcmssktaredlervvqklftpyteieaeneqvek
prllwalyfnmrdssdisrdcyndlpsnvyvcsgpdsglgndnavkqaetlfqqicpned
fcpappnpedivldgdssqqevpessvtpetnsetpkestvlgnpeepse

Sequence, based on observed residues (ATOM records): (download)

>1vg9G (G:)
dnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlkey
qenndvvtensmwqeqileneeaiplsskdktiqhvevfcyasqdritysqiikegrrfn
idlvskllysrgllidlliksnvsryaefknitrilafregtveqvpcsradvfnskqlt
mvekrmlmkfltfcveyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtsett
sctvdglkatkkflqclgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclv
vdkesrkckavidqfgqriiskhfiiedsylsentcsrvqyrqisravlitdgsvlrtda
dqqvsiltvpaeepgsfavrvielcsstmtcmkgtylvhltcmssktaredlervvqklf
tpyteekprllwalyfnmrdssdisrdcyndlpsnvyvcsgpdsglgndnavkqaetlfq
qicpnedfcpappnpedivldg

Chain 'H':
Sequence, based on SEQRES records: (download)

>1vg9H (H:)
mtsrkkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmq
iwdtagqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpf
vvlgnkidlenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
elyne

Sequence, based on observed residues (ATOM records): (download)

>1vg9H (H:)
kvllkviilgdsgvgktslmnqyvnkkfsnqyigadfltkevmvddrlvtmqiwdtagqe
rfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlgnkid
lenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqeteve