SCOP 1.71: Structural Classification of Proteins — extended

PDB entry 1vf5

View 1vf5 on RCSB PDB site
Description: Crystal Structure of Cytochrome b6f Complex from M.laminosus
Deposited on 2004-04-08, released 2004-04-20
The last revision prior to the SCOP 1.71 freeze date was dated 2004-04-20, with a file datestamp of 2004-04-20.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.258
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Domains in SCOP 1.71: d1vf5a_
Chain 'B':
Domains in SCOP 1.71: d1vf5b_
Chain 'C':
Domains in SCOP 1.71: d1vf5c1, d1vf5c2, d1vf5c3
Chain 'D':
Domains in SCOP 1.71: d1vf5d1, d1vf5d2
Chain 'E':
Domains in SCOP 1.71: d1vf5e_
Chain 'F':
Domains in SCOP 1.71: d1vf5f_
Chain 'G':
Domains in SCOP 1.71: d1vf5g_
Chain 'H':
Domains in SCOP 1.71: d1vf5h_
Chain 'N':
Domains in SCOP 1.71: d1vf5n_
Chain 'O':
Domains in SCOP 1.71: d1vf5o_
Chain 'P':
Domains in SCOP 1.71: d1vf5p1, d1vf5p2, d1vf5p3
Chain 'Q':
Domains in SCOP 1.71: d1vf5q1, d1vf5q2
Chain 'R':
Domains in SCOP 1.71: d1vf5r_
Chain 'S':
Domains in SCOP 1.71: d1vf5s_
Chain 'T':
Domains in SCOP 1.71: d1vf5t_
Chain 'U':
Domains in SCOP 1.71: d1vf5u_

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1vf5A (A:)
manvydwfqerleiqaladdvtskyvpphvnifyclggitltcfliqfatgfamtfyykp
tvteayasvqyimnevsfgwlirsihrwsasmmvlmmilhvfrvyltggfkkpreltwis
gvilavitvsfgvtgyslpwdqvgywavkivsgvpeaipvvgvlisdllrggssvgqatl
tryysahtfvlpwliavfmllhflmirkqgisgpl

Sequence, based on observed residues (ATOM records): (download)

>1vf5A (A:)
eiqaladdvtskyvpphvnifyclggitltcfliqfatgfamtfyykptvteayasvqyi
mnevsfgwlirsihrwsasmmvlmmilhvfrvyltggfkkpreltwisgvilavitvsfg
vtgyslpwdqvgywavkivsgvpeaipvvgvlisdllrggssvgqatltryysahtfvlp
wliavfmllhflmirkqgisgp

Chain 'B':
Sequence, based on SEQRES records: (download)

>1vf5B (B:)
matlkkpdlsdpklraklakgmghnyygepawpndllyvfpvvimgtfacivalsvldpa
mvgepanpfatpleilpewylypvfqilrslpnkllgvllmasvplglilvpfienvnkf
qnpfrrpvattiflfgtlvtiwlgigaalpldktltlglf

Sequence, based on observed residues (ATOM records): (download)

>1vf5B (B:)
lakgmghnyygepawpndllyvfpvvimgtfacivalsvldpamvgepanpfatpleilp
ewylypvfqilrslpnkllgvllmasvplglilvpfienvnkfqnpfrrpvattiflfgt
lvtiwlgigaalpldktl

Chain 'C':
Sequence, based on SEQRES records: (download)

>1vf5C (C:)
ypfwaqqtypptpreptgrivcanchlaakpaevevpqsvlpdtvfkavvkipydtklqq
vaadgskvglnvgavlmlpegfkiapeeripeelkkevgdvyfqpykegqdnvllvgplp
geqyqeivfpvlspnpttdknihfgkyaihlganrgrgqiyptgeksnnnvftasatgti
tkiakeedeygnvkyqvsiqtdsgktvvdtipagpelivsegqavkagealtnnpnvggf
gqddteivlqdpnrvkwmiaficlvmlaqlmlilkkkqvekvqaaemnf

Sequence, based on observed residues (ATOM records): (download)

>1vf5C (C:)
ypfwaqqtypptpreptgrivcanchlaakpaevevpqsvlpdtvfkavvkipydtklqq
vaadgskvglnvgavlmlpegfkiapeeripeelkkevgdvyfqpykegqdnvllvgplp
geqyqeivfpvlspnpttdknihfgkyaihlganrgrgqiyptgeksnnnvftasatgti
tkiakeedeygnvkyqvsiqtdsgktvvdtipagpelivsegqavkagealtnnpnvggf
gqddteivlqdpnrvkwmiaficlvmlaqlmlilkkkqvekvqaae

Chain 'D':
Sequence, based on SEQRES records: (download)

>1vf5D (D:)
maqftesmdvpdmgrrqfmnllafgtvtgvalgalyplvkyfippsggavgggttakdkl
gnnvkvskfleshnagdrvlvqglkgdptyivveskeairdyginavcthlgcvvpwnaa
enkfkcpchgsqydetgrvirgpaplslalchatvqddnivltpwtetdfrtgekpwwv

Sequence, based on observed residues (ATOM records): (download)

>1vf5D (D:)
dmgrrqfmnllafgtvtgvalgalyplvkyfippsggavgggttakdklgnnvkvskfle
shnagdrvlvqglkgdptyivveskeairdyginavcthlgcvvpwnaaenkfkcpchgs
qydetgrvirgpaplslalchatvqddnivltpwtetdfrtgekpwwv

Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
```
>1vf5E (E:)
milgavfyivfialffgiavgiifaiksikli
```
Chain 'F':
Sequence, based on SEQRES records: (download)
```
>1vf5F (F:)
mteemlyaallsfglifvgwglgvlllkiqgaeke
```
Sequence, based on observed residues (ATOM records): (download)
```
>1vf5F (F:)
mteemlyaallsfglifvgwglgvlllkiqgae
```
Chain 'G':
Sequence, based on SEQRES records: (download)
```
>1vf5G (G:)
mveplldglvlglvfatlgglfyaayqqykrpnelgg
```
Sequence, based on observed residues (ATOM records): (download)
```
>1vf5G (G:)
lvlglvfatlgglfyaayqqykr
```
Chain 'H':
Sequence, based on SEQRES records: (download)
```
>1vf5H (H:)
meidvlgwvallvvftwsiamvvwgrngl
```
Sequence, based on observed residues (ATOM records): (download)
```
>1vf5H (H:)
idvlgwvallvvftwsiamvvwgrngl
```

Chain 'N':
Sequence, based on SEQRES records: (download)

>1vf5N (N:)
manvydwfqerleiqaladdvtskyvpphvnifyclggitltcfliqfatgfamtfyykp
tvteayasvqyimnevsfgwlirsihrwsasmmvlmmilhvfrvyltggfkkpreltwis
gvilavitvsfgvtgyslpwdqvgywavkivsgvpeaipvvgvlisdllrggssvgqatl
tryysahtfvlpwliavfmllhflmirkqgisgpl

Sequence, based on observed residues (ATOM records): (download)

>1vf5N (N:)
eiqaladdvtskyvpphvnifyclggitltcfliqfatgfamtfyykptvteayasvqyi
mnevsfgwlirsihrwsasmmvlmmilhvfrvyltggfkkpreltwisgvilavitvsfg
vtgyslpwdqvgywavkivsgvpeaipvvgvlisdllrggssvgqatltryysahtfvlp
wliavfmllhflmirkqgisgp

Chain 'O':
Sequence, based on SEQRES records: (download)

>1vf5O (O:)
matlkkpdlsdpklraklakgmghnyygepawpndllyvfpvvimgtfacivalsvldpa
mvgepanpfatpleilpewylypvfqilrslpnkllgvllmasvplglilvpfienvnkf
qnpfrrpvattiflfgtlvtiwlgigaalpldktltlglf

Sequence, based on observed residues (ATOM records): (download)

>1vf5O (O:)
lakgmghnyygepawpndllyvfpvvimgtfacivalsvldpamvgepanpfatpleilp
ewylypvfqilrslpnkllgvllmasvplglilvpfienvnkfqnpfrrpvattiflfgt
lvtiwlgigaalpldktl

Chain 'P':
Sequence, based on SEQRES records: (download)

>1vf5P (P:)
ypfwaqqtypptpreptgrivcanchlaakpaevevpqsvlpdtvfkavvkipydtklqq
vaadgskvglnvgavlmlpegfkiapeeripeelkkevgdvyfqpykegqdnvllvgplp
geqyqeivfpvlspnpttdknihfgkyaihlganrgrgqiyptgeksnnnvftasatgti
tkiakeedeygnvkyqvsiqtdsgktvvdtipagpelivsegqavkagealtnnpnvggf
gqddteivlqdpnrvkwmiaficlvmlaqlmlilkkkqvekvqaaemnf

Sequence, based on observed residues (ATOM records): (download)

>1vf5P (P:)
ypfwaqqtypptpreptgrivcanchlaakpaevevpqsvlpdtvfkavvkipydtklqq
vaadgskvglnvgavlmlpegfkiapeeripeelkkevgdvyfqpykegqdnvllvgplp
geqyqeivfpvlspnpttdknihfgkyaihlganrgrgqiyptgeksnnnvftasatgti
tkiakeedeygnvkyqvsiqtdsgktvvdtipagpelivsegqavkagealtnnpnvggf
gqddteivlqdpnrvkwmiaficlvmlaqlmlilkkkqvekvqaae

Chain 'Q':
Sequence, based on SEQRES records: (download)

>1vf5Q (Q:)
maqftesmdvpdmgrrqfmnllafgtvtgvalgalyplvkyfippsggavgggttakdkl
gnnvkvskfleshnagdrvlvqglkgdptyivveskeairdyginavcthlgcvvpwnaa
enkfkcpchgsqydetgrvirgpaplslalchatvqddnivltpwtetdfrtgekpwwv

Sequence, based on observed residues (ATOM records): (download)

>1vf5Q (Q:)
dmgrrqfmnllafgtvtgvalgalyplvkyfippsggavgggttakdklgnnvkvskfle
shnagdrvlvqglkgdptyivveskeairdyginavcthlgcvvpwnaaenkfkcpchgs
qydetgrvirgpaplslalchatvqddnivltpwtetdfrtgekpwwv

Chain 'R':
Sequence; same for both SEQRES and ATOM records: (download)
```
>1vf5R (R:)
milgavfyivfialffgiavgiifaiksikli
```
Chain 'S':
Sequence; same for both SEQRES and ATOM records: (download)
```
>1vf5S (S:)
mteemlyaallsfglifvgwglgvlllkiqgaeke
```
Chain 'T':
Sequence, based on SEQRES records: (download)
```
>1vf5T (T:)
mveplldglvlglvfatlgglfyaayqqykrpnelgg
```
Sequence, based on observed residues (ATOM records): (download)
```
>1vf5T (T:)
lvlglvfatlgglfyaayqqykrpnel
```
Chain 'U':
Sequence, based on SEQRES records: (download)
```
>1vf5U (U:)
meidvlgwvallvvftwsiamvvwgrngl
```
Sequence, based on observed residues (ATOM records): (download)
```
>1vf5U (U:)
idvlgwvallvvftwsiamvvwgrngl
```