PDB entry 1v7p

View 1v7p on RCSB PDB site
Description: Structure of EMS16-alpha2-I domain complex
Class: toxin/cell adhesion
Keywords: snake venom, c-type lectin, antagonist, integrin, cell adhesion, glycoprotein
Deposited on 2003-12-19, released 2004-09-07
The last revision prior to the SCOP 1.73 freeze date was dated 2004-09-07, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.188
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: EMS16 A chain
    Species: Echis multisquamatus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1v7pa_
  • Chain 'B':
    Compound: EMS16 B chain
    Species: Echis multisquamatus
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7T2Q0 (0-End)
      • engineered (42)
    Domains in SCOP 1.73: d1v7pb_
  • Chain 'C':
    Compound: Integrin alpha-2
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1v7pc_
  • Heterogens: NAG, PO4, MN, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1v7pA (A:)
dfdcpsdwtaydqhcylaigepqnwyeaerfcteqakdghlvsiqsreegnfvaqlvsgf
mhrseiyvwiglrdrreeqqcnpewndgskiiyvnwkegeskmcqgltkwtnfhdwnnin
cedlypfvckfsav

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1v7pB (B:)
cplgwssfdqhcykvfepvknwteaeeicmqqhkgsrlasihsseeeafvsklaskalkf
tsmwiglnnpwkdckwewsdnarfdykawkrrpyctvmvvkpdrifwftrgceksvsfvc
kfltdpav

    Sequence, based on observed residues (ATOM records): (download) 
    >1v7pB (B:)
cplgwssfdqhcykvfepvknwteaeeicmqqhkgsrlasihsseeeafvsklaskalkf
tsmwiglnnpwkdckwewsdnarfdykawkrrpyctvmvvkpdrifwftrgceksvsfvc
kfltdpa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1v7pC (C:)
gsspslidvvvvcdesnsiypwdavknflekfvqgldigptktqvgliqyannprvvfnl
ntyktkeemivatsqtsqyggdltntfgaiqyarkyaysaasggrrsatkvmvvvtdges
hdgsmlkavidqcnhdnilrfgiavlgylnrnaldtknlikeikaiasipteryffnvsd
eaallekagtlgeqifsieg

    Sequence, based on observed residues (ATOM records): (download) 
    >1v7pC (C:)
lidvvvvcdesnsiypwdavknflekfvqgldigptktqvgliqyannprvvfnlntykt
keemivatsqtsqyggdltntfgaiqyarkyaysaasggrrsatkvmvvvtdgeshdgsm
lkavidqcnhdnilrfgiavlgylnrnaldtknlikeikaiasipteryffnvsdeaall
ekagtlgeqifsi