SCOPe 2.03: Structural Classification of Proteins

PDB entry 1uzh

View 1uzh on RCSB PDB site
Description: a chimeric chlamydomonas, synechococcus rubisco enzyme
Class: lyase
Keywords: lyase, rubisco, photosynthesis, carbon dioxide fixation, photorespiration, oxidoreductase, monooxygenase, chloroplast, transit peptide, multigene family
Deposited on 2004-03-12, released 2005-05-31
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.162
AEROSPACI score: -1.57 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: ribulose bisphosphate carboxylase large chain
Species: Chlamydomonas reinhardtii [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877 (Start-474)
  - conflict (45)
Domains in SCOPe 2.03: d1uzha1, d1uzha2
Chain 'B':
Compound: ribulose bisphosphate carboxylase large chain
Species: Chlamydomonas reinhardtii [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877 (Start-474)
  - conflict (45)
Domains in SCOPe 2.03: d1uzhb1, d1uzhb2
Chain 'C':
Compound: ribulose bisphosphate carboxylase small chain 2, ribulose bisphosphate carboxylase small chain
Species: CHLAMYDOMONAS REINHARDTII, SYNECHOCOCCUS SP
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (53-121)
- Uniprot P04716 (46-52)
Domains in SCOPe 2.03: d1uzhc1
Chain 'E':
Compound: ribulose bisphosphate carboxylase large chain
Species: Chlamydomonas reinhardtii [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877 (Start-474)
  - conflict (45)
Domains in SCOPe 2.03: d1uzhe1, d1uzhe2
Chain 'F':
Compound: ribulose bisphosphate carboxylase small chain 2, ribulose bisphosphate carboxylase small chain
Species: CHLAMYDOMONAS REINHARDTII, SYNECHOCOCCUS SP
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (53-121)
- Uniprot P04716 (46-52)
Domains in SCOPe 2.03: d1uzhf_
Chain 'H':
Compound: ribulose bisphosphate carboxylase large chain
Species: Chlamydomonas reinhardtii [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877 (Start-474)
  - conflict (45)
Domains in SCOPe 2.03: d1uzhh1, d1uzhh2
Chain 'I':
Compound: ribulose bisphosphate carboxylase small chain 2, ribulose bisphosphate carboxylase small chain
Species: CHLAMYDOMONAS REINHARDTII, SYNECHOCOCCUS SP
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (53-121)
- Uniprot P04716 (46-52)
Domains in SCOPe 2.03: d1uzhi_
Chain 'J':
Compound: ribulose bisphosphate carboxylase small chain 2, ribulose bisphosphate carboxylase small chain
Species: CHLAMYDOMONAS REINHARDTII, SYNECHOCOCCUS SP
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (53-121)
- Uniprot P04716 (46-52)
Domains in SCOPe 2.03: d1uzhj_
Chain 'K':
Compound: ribulose bisphosphate carboxylase large chain
Species: Chlamydomonas reinhardtii [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877 (Start-474)
  - conflict (45)
Domains in SCOPe 2.03: d1uzhk1, d1uzhk2
Chain 'M':
Compound: ribulose bisphosphate carboxylase small chain 2, ribulose bisphosphate carboxylase small chain
Species: CHLAMYDOMONAS REINHARDTII, SYNECHOCOCCUS SP
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (53-121)
- Uniprot P04716 (46-52)
Domains in SCOPe 2.03: d1uzhm_
Chain 'O':
Compound: ribulose bisphosphate carboxylase large chain
Species: Chlamydomonas reinhardtii [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877 (Start-474)
  - conflict (45)
Domains in SCOPe 2.03: d1uzho1, d1uzho2
Chain 'P':
Compound: ribulose bisphosphate carboxylase small chain 2, ribulose bisphosphate carboxylase small chain
Species: CHLAMYDOMONAS REINHARDTII, SYNECHOCOCCUS SP
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (53-121)
- Uniprot P04716 (46-52)
Domains in SCOPe 2.03: d1uzhp_
Chain 'R':
Compound: ribulose bisphosphate carboxylase large chain
Species: Chlamydomonas reinhardtii [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877 (Start-474)
  - conflict (45)
Domains in SCOPe 2.03: d1uzhr1, d1uzhr2
Chain 'T':
Compound: ribulose bisphosphate carboxylase small chain 2, ribulose bisphosphate carboxylase small chain
Species: CHLAMYDOMONAS REINHARDTII, SYNECHOCOCCUS SP
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (53-121)
- Uniprot P04716 (46-52)
Domains in SCOPe 2.03: d1uzht_
Chain 'V':
Compound: ribulose bisphosphate carboxylase large chain
Species: Chlamydomonas reinhardtii [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877 (Start-474)
  - conflict (45)
Domains in SCOPe 2.03: d1uzhv1, d1uzhv2
Chain 'W':
Compound: ribulose bisphosphate carboxylase small chain 2, ribulose bisphosphate carboxylase small chain
Species: CHLAMYDOMONAS REINHARDTII, SYNECHOCOCCUS SP
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (53-121)
- Uniprot P04716 (46-52)
Domains in SCOPe 2.03: d1uzhw_
Heterogens: MG, CAP, EDO, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1uzhA (A:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Sequence, based on observed residues (ATOM records): (download)

>1uzhA (A:)
agfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtwttvw
tdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfgfkal
ralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknygravy
eclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagtceem
mkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrnhgih
frvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftqdwcs
mpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvaleactqa
rnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Chain 'B':
Sequence, based on SEQRES records: (download)

>1uzhB (B:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Sequence, based on observed residues (ATOM records): (download)

>1uzhB (B:)
agagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtwtt
vwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfgfk
alralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagtce
emmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrnhg
ihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftqdw
csmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvaleact
qarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)

>1uzhC (C:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaehsnpeefywtmwkl
pmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimgflvqrpktardfqpankr
sv

Chain 'E':
Sequence, based on SEQRES records: (download)

>1uzhE (E:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Sequence, based on observed residues (ATOM records): (download)

>1uzhE (E:)
tkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtw
ttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfg
fkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknyg
ravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagt
ceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrn
hgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftq
dwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvalea
ctqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)

>1uzhF (F:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaehsnpeefywtmwkl
pmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimgflvqrpktardfqpankr
sv

Chain 'H':
Sequence, based on SEQRES records: (download)

>1uzhH (H:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Sequence, based on observed residues (ATOM records): (download)

>1uzhH (H:)
tkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtw
ttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfg
fkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknyg
ravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagt
ceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrn
hgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftq
dwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvalea
ctqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)

>1uzhI (I:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaehsnpeefywtmwkl
pmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimgflvqrpktardfqpankr
sv

Chain 'J':
Sequence; same for both SEQRES and ATOM records: (download)

>1uzhJ (J:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaehsnpeefywtmwkl
pmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimgflvqrpktardfqpankr
sv

Chain 'K':
Sequence, based on SEQRES records: (download)

>1uzhK (K:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Sequence, based on observed residues (ATOM records): (download)

>1uzhK (K:)
tkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtw
ttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfg
fkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknyg
ravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagt
ceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrn
hgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftq
dwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvalea
ctqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Chain 'M':
Sequence; same for both SEQRES and ATOM records: (download)

>1uzhM (M:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaehsnpeefywtmwkl
pmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimgflvqrpktardfqpankr
sv

Chain 'O':
Sequence, based on SEQRES records: (download)

>1uzhO (O:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Sequence, based on observed residues (ATOM records): (download)

>1uzhO (O:)
tkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtw
ttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfg
fkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknyg
ravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagt
ceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrn
hgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftq
dwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvalea
ctqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Chain 'P':
Sequence; same for both SEQRES and ATOM records: (download)

>1uzhP (P:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaehsnpeefywtmwkl
pmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimgflvqrpktardfqpankr
sv

Chain 'R':
Sequence, based on SEQRES records: (download)

>1uzhR (R:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Sequence, based on observed residues (ATOM records): (download)

>1uzhR (R:)
tkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtw
ttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfg
fkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknyg
ravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagt
ceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrn
hgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftq
dwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvalea
ctqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Chain 'T':
Sequence; same for both SEQRES and ATOM records: (download)

>1uzhT (T:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaehsnpeefywtmwkl
pmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimgflvqrpktardfqpankr
sv

Chain 'V':
Sequence, based on SEQRES records: (download)

>1uzhV (V:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Sequence, based on observed residues (ATOM records): (download)

>1uzhV (V:)
tkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtw
ttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfg
fkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknyg
ravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagt
ceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrn
hgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftq
dwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvalea
ctqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

Chain 'W':
Sequence; same for both SEQRES and ATOM records: (download)

>1uzhW (W:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaehsnpeefywtmwkl
pmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimgflvqrpktardfqpankr
sv