PDB entry 1uqs

View 1uqs on RCSB PDB site
Description: the crystal structure of human cd1b with a bound bacterial glycolipid
Class: glycoprotein
Keywords: lipid, gmm, cd1b, MHC, antigen presentation
Deposited on 2003-10-16, released 2003-10-30
The last revision prior to the SCOP 1.73 freeze date was dated 2004-02-12, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.236
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: T-cell surface glycoprotein cd1b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1uqsa1, d1uqsa2
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1uqsb_
  • Heterogens: GMM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1uqsA (A:)
mgsehafqgptsfhviqtssftnstwaqtqgsgwlddlqihgwdsdsgtaiflkpwskgn
fsdkevaeleeifrvyifgfarevqdfagdfqmkypfeiqgiagcelhsggaivsflrga
lggldflsvknascvpspeggsraqkfcaliiqyqgimetvrillyetcpryllgvlnag
kadlqrqvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilp
nanwtwylratldvadgeaaglscrvkhsslegqdiilywgpgsggglndifeaqkiewh

    Sequence, based on observed residues (ATOM records): (download) 
    >1uqsA (A:)
afqgptsfhviqtssftnstwaqtqgsgwlddlqihgwdsdsgtaiflkpwskgnfsdke
vaeleeifrvyifgfarevqdfagdfqmkypfeiqgiagcelhsggaivsflrgalggld
flsvknascvpspeggsraqkfcaliiqyqgimetvrillyetcpryllgvlnagkadlq
rqvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnanwt
wylratldvadgeaaglscrvkhsslegqdiilywgpgsgg

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1uqsB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm