PDB entry 1u58

View 1u58 on RCSB PDB site
Description: Crystal structure of the murine cytomegalovirus MHC-I homolog m144
Class: immune system
Keywords: MCMV, MHC-I homolog, m144, beta-2m, IMMUNE SYSTEM
Deposited on 2004-07-27, released 2005-07-19
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.211
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MHC-I homolog m144
    Species: Murid herpesvirus 1 [TaxId:10366]
    Gene: m144
    Database cross-references and differences (RAF-indexed):
    • PDB 1U58
    Domains in SCOPe 2.03: d1u58a1, d1u58a2
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • GB NP_033865 (0-End)
    Domains in SCOPe 2.03: d1u58b_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1u58A (A:)
    mgtedssesglryaytlvvdgtantrrcfgtghvdgeafvgysnnkthgigrwvnashve
    eenkefvrqckelqaeldkmqnnskvigvktvqldvgctskiekhyaydgneteddtats
    aserdrdcqkklteyrklvlasavspqleverrssgreggmrlrcfardyypadleirww
    kddggggalpqtskqhhdplpsgnglyqkhidvyvdgglehvyscrvkgiatglelqivr
    wkgyargaghhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1u58A (A:)
    esglryaytlvvdgtantrrcfgtghvdgeafvgysnnkthgigrwvnashveeenkefv
    rqckelqaeldkmqnnskvigvktvqldvgctskiekhyaydgnetecqkklteyrklvl
    asavspqleverrssgreggmrlrcfardyypadleirwwkddggggalpqtskqhhdpl
    psgnglyqkhidvyvdgglehvyscrvkgiatglelqivrwk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1u58B (B:)
    iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
    sfyilahteftptetdtyacrvkhasmaepktvywdrdm
    

    Sequence, based on observed residues (ATOM records): (download)
    >1u58B (B:)
    iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
    sfyilahteftptetdtyacrvkhasmaepktvywdrd