PDB entry 1u3h
View 1u3h on RCSB PDB site
Description: Crystal structure of mouse TCR 172.10 complexed with MHC class II I-Au molecule at 2.4 A
Class: immune system
Keywords: complex, IMMUNE SYSTEM
Deposited on
2004-07-21, released
2005-05-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-02-05, with a file datestamp of
2020-01-31.
Experiment type: XRAY
Resolution: 2.42 Å
R-factor: N/A
AEROSPACI score: 0.21
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: T-cell receptor alpha-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1u3ha1 - Chain 'B':
Compound: Mouse TCRVbeta 172.10, extracellular variable domain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1u3hb1 - Chain 'C':
Compound: H-2 class II histocompatibility antigen, A-U alpha chain
Species: Mus musculus [TaxId:10090]
Gene: H2-Aa
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1u3hc1, d1u3hc2, d1u3hc3 - Chain 'D':
Compound: H-2 class II histocompatibility antigen, A-U beta chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1u3hd1, d1u3hd2 - Chain 'E':
Compound: T-cell receptor alpha-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1u3he_ - Chain 'F':
Compound: Mouse TCRVbeta 172.10, extracellular variable domain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1u3hf_ - Chain 'G':
Compound: H-2 class II histocompatibility antigen, A-U alpha chain
Species: Mus musculus [TaxId:10090]
Gene: H2-Aa
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1u3hg1, d1u3hg2, d1u3hg3 - Chain 'H':
Compound: H-2 class II histocompatibility antigen, A-U beta chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1u3hh1, d1u3hh2 - Chain 'I':
Compound: Myelin basic protein (MBP)-peptide
Species: synthetic construct, synthetic [TaxId:32630]
Database cross-references and differences (RAF-indexed):
- Chain 'P':
Compound: Myelin basic protein (MBP)-peptide
Species: synthetic construct, synthetic [TaxId:32630]
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1u3hA (A:)
qvrqspqsltvwegetailncsyensafdyfpwyqqfpgegpallisilsvsdkkedgrf
tiffnkrekklslhiadsqpgdsatyfcaasansgtyqrfgtgtklqvvp
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1u3hB (B:)
avtqsprnkvavtgekvtlscnqtnnhnnmywyrqdtghglrliyysygagstekgdipd
gykasrpsqenfsltlesatpsqtsvyfcasgdagggyeqyfgpgtrltvl
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1u3hC (C:)
ieadhvgsygivvyqspgdigqytfefdgdelfyvdldkketiwmlpefaqlrsfdpqgg
lqniatgkhnlgvltkrsnstpatneapqatvfpkspvllgqpntlicfvdnifppvini
twlrnsksvadgvyetsffvnrdysfhklsyltfipsdddiydckvehwgleepvlkhwe
pe
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1u3hD (D:)
gdserhfvvqfqpfcyftngtqriryvtryiynreeylrfdsdvgeyravtelgrpdaey
ynkqylertraeldtvcrynyeetevptslrrleqpnvvislsrtealnhhntlvcsvtd
fypakikvrwfrngqeetvgvsstqlirngdwtfqvlvmlemtprrgevytchvehpslk
spitvewra
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1u3hE (E:)
qvrqspqsltvwegetailncsyensafdyfpwyqqfpgegpallisilsvsdkkedgrf
tiffnkrekklslhiadsqpgdsatyfcaasansgtyqrfgtgtklqvvp
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>1u3hF (F:)
avtqsprnkvavtgekvtlscnqtnnhnnmywyrqdtghglrliyysygagstekgdipd
gykasrpsqenfsltlesatpsqtsvyfcasgdagggyeqyfgpgtrltvl
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>1u3hG (G:)
ieadhvgsygivvyqspgdigqytfefdgdelfyvdldkketiwmlpefaqlrsfdpqgg
lqniatgkhnlgvltkrsnstpatneapqatvfpkspvllgqpntlicfvdnifppvini
twlrnsksvadgvyetsffvnrdysfhklsyltfipsdddiydckvehwgleepvlkhwe
pe
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1u3hH (H:)
gdserhfvvqfqpfcyftngtqriryvtryiynreeylrfdsdvgeyravtelgrpdaey
ynkqylertraeldtvcrynyeetevptslrrleqpnvvislsrtealnhhntlvcsvtd
fypakikvrwfrngqeetvgvsstqlirngdwtfqvlvmlemtprrgevytchvehpslk
spitvewra
- Chain 'I':
No sequence available.
- Chain 'P':
No sequence available.