PDB entry 1ty2

View 1ty2 on RCSB PDB site
Description: Crystal structure of the streptococcal pyrogenic exotoxin J (SPE-J)
Class: immune system
Keywords: Superantigen, T-cell receptor binding, mutagenesis, dimerization, crystal structure, zinc binding, immune system
Deposited on 2004-07-07, released 2004-08-17
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.218
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative exotoxin (superantigen)
    Species: Streptococcus pyogenes [TaxId:1314]
    Gene: spe-j
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1ty2a1, d1ty2a2
  • Chain 'B':
    Compound: putative exotoxin (superantigen)
    Species: Streptococcus pyogenes [TaxId:1314]
    Gene: spe-j
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1ty2b1, d1ty2b2
  • Chain 'C':
    Compound: putative exotoxin (superantigen)
    Species: Streptococcus pyogenes [TaxId:1314]
    Gene: spe-j
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1ty2c1, d1ty2c2
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ty2A (A:)
ksdsenikdvklqlnyayeiipvdytncnidyltthdfyidissykkknfsvdsevesyi
ttkftknqkvnifglpyiftrydvyyiyggvtpsvnsnsenskivgnllidgvqqktlin
pikidkpiftiqefdfkirqylmqtykiydpnspyikgqleiaingnkhesfnlydatss
strsdifkkykdnktinmkdfshfdiylwtk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ty2B (B:)
ksdsenikdvklqlnyayeiipvdytncnidyltthdfyidissykkknfsvdsevesyi
ttkftknqkvnifglpyiftrydvyyiyggvtpsvnsnsenskivgnllidgvqqktlin
pikidkpiftiqefdfkirqylmqtykiydpnspyikgqleiaingnkhesfnlydatss
strsdifkkykdnktinmkdfshfdiylwtk

    Sequence, based on observed residues (ATOM records): (download) 
    >1ty2B (B:)
ksdsenikdvklqlnyayeiipvdytncnidyltthdfyidissykkknfsvdsevesyi
ttkftknqkvnifglpyiftrydvyyiyggvtpsvnsnkivgnllidgvqqktlinpiki
dkpiftiqefdfkirqylmqtykiydpnspyikgqleiaingnkhesfnlydatssstrs
difkkykdnktinmkdfshfdiylwtk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1ty2C (C:)
ksdsenikdvklqlnyayeiipvdytncnidyltthdfyidissykkknfsvdsevesyi
ttkftknqkvnifglpyiftrydvyyiyggvtpsvnsnsenskivgnllidgvqqktlin
pikidkpiftiqefdfkirqylmqtykiydpnspyikgqleiaingnkhesfnlydatss
strsdifkkykdnktinmkdfshfdiylwtk

    Sequence, based on observed residues (ATOM records): (download) 
    >1ty2C (C:)
senikdvklqlnyayeiipvdytncnidyltthdfyidissykkknfsvdsevesyittk
ftknqkvnifglpyiftrydvyyiyggvtpsvnsnsenskivgnllidgvqqktlinpik
idkpiftiqefdfkirqylmqtykiydpnspyikgqleiaingnkhesfnlydatssstr
sdifkkykdnktinmkdfshfdiylwtk