PDB entry 1toc
View 1toc on RCSB PDB site
Description: structure of serine proteinase
Class: complex (hydrolase/inhibitor)
Keywords: vitamin k, zymogen, gamma-carboxyglutamic acid, acute phase, liver, hydrolase, serine protease kunitz-like inhibitor, kringle, signal, complex (hydrolase/inhibitor) complex
Deposited on
1996-07-20, released
1997-07-23
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.23
AEROSPACI score: 0.18
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: thrombin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1toc.1 - Chain 'B':
Compound: thrombin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1toc.1 - Chain 'C':
Compound: thrombin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1toc.2 - Chain 'D':
Compound: thrombin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1toc.2 - Chain 'E':
Compound: thrombin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1toc.3 - Chain 'F':
Compound: thrombin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1toc.3 - Chain 'G':
Compound: thrombin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1toc.4 - Chain 'H':
Compound: thrombin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1toc.4 - Chain 'R':
Compound: ornithodorin
Species: Ornithodoros moubata [TaxId:6938]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1tocr1, d1tocr2 - Chain 'S':
Compound: ornithodorin
Species: Ornithodoros moubata [TaxId:6938]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1tocs1, d1tocs2 - Chain 'T':
Compound: ornithodorin
Species: Ornithodoros moubata [TaxId:6938]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1toct1, d1toct2 - Chain 'U':
Compound: ornithodorin
Species: Ornithodoros moubata [TaxId:6938]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1tocu1, d1tocu2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1tocA (A:)
tsedhfqpffnektfgageadcglrplfekkqvqdqtekelfesyiegr
Sequence, based on observed residues (ATOM records): (download)
>1tocA (A:)
adcglrplfekkqvqdqtekelfesyie
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1tocB (B:)
ivegqdaevglspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftvddll
vrigkhsrtryerkvekismldkiyihprynwkenldrdiallklkrpielsdyihpvcl
pdkqtaakllhagfkgrvtgwgnrretwttsvaevqpsvlqvvnlplverpvckastrir
itdnmfcagykpgegkrgdacegdsggpfvmkspynnrwyqmgivswgegcdrdgkygfy
thvfrlkkwiqkvidrlgs
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1tocC (C:)
tsedhfqpffnektfgageadcglrplfekkqvqdqtekelfesyiegr
Sequence, based on observed residues (ATOM records): (download)
>1tocC (C:)
adcglrplfekkqvqdqtekelfesyie
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1tocD (D:)
ivegqdaevglspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftvddll
vrigkhsrtryerkvekismldkiyihprynwkenldrdiallklkrpielsdyihpvcl
pdkqtaakllhagfkgrvtgwgnrretwttsvaevqpsvlqvvnlplverpvckastrir
itdnmfcagykpgegkrgdacegdsggpfvmkspynnrwyqmgivswgegcdrdgkygfy
thvfrlkkwiqkvidrlgs
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1tocE (E:)
tsedhfqpffnektfgageadcglrplfekkqvqdqtekelfesyiegr
Sequence, based on observed residues (ATOM records): (download)
>1tocE (E:)
adcglrplfekkqvqdqtekelfesyie
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>1tocF (F:)
ivegqdaevglspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftvddll
vrigkhsrtryerkvekismldkiyihprynwkenldrdiallklkrpielsdyihpvcl
pdkqtaakllhagfkgrvtgwgnrretwttsvaevqpsvlqvvnlplverpvckastrir
itdnmfcagykpgegkrgdacegdsggpfvmkspynnrwyqmgivswgegcdrdgkygfy
thvfrlkkwiqkvidrlgs
- Chain 'G':
Sequence, based on SEQRES records: (download)
>1tocG (G:)
tsedhfqpffnektfgageadcglrplfekkqvqdqtekelfesyiegr
Sequence, based on observed residues (ATOM records): (download)
>1tocG (G:)
adcglrplfekkqvqdqtekelfesyie
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1tocH (H:)
ivegqdaevglspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftvddll
vrigkhsrtryerkvekismldkiyihprynwkenldrdiallklkrpielsdyihpvcl
pdkqtaakllhagfkgrvtgwgnrretwttsvaevqpsvlqvvnlplverpvckastrir
itdnmfcagykpgegkrgdacegdsggpfvmkspynnrwyqmgivswgegcdrdgkygfy
thvfrlkkwiqkvidrlgs
- Chain 'R':
Sequence; same for both SEQRES and ATOM records: (download)
>1tocR (R:)
slnvlcnnphtadcnndaqvdryfregttclmspactsegyasqhecqqacfvggedhss
emhssclgdpptscaegtdityydsdsktckvlaascpsgentfesevecqvacgapieg
- Chain 'S':
Sequence; same for both SEQRES and ATOM records: (download)
>1tocS (S:)
slnvlcnnphtadcnndaqvdryfregttclmspactsegyasqhecqqacfvggedhss
emhssclgdpptscaegtdityydsdsktckvlaascpsgentfesevecqvacgapieg
- Chain 'T':
Sequence; same for both SEQRES and ATOM records: (download)
>1tocT (T:)
slnvlcnnphtadcnndaqvdryfregttclmspactsegyasqhecqqacfvggedhss
emhssclgdpptscaegtdityydsdsktckvlaascpsgentfesevecqvacgapieg
- Chain 'U':
Sequence; same for both SEQRES and ATOM records: (download)
>1tocU (U:)
slnvlcnnphtadcnndaqvdryfregttclmspactsegyasqhecqqacfvggedhss
emhssclgdpptscaegtdityydsdsktckvlaascpsgentfesevecqvacgapieg