PDB entry 1tdh

View 1tdh on RCSB PDB site
Description: Crystal structure of human endonuclease VIII-like 1 (NEIL1)
Class: hydrolase
Keywords: helix two turns helix, zinc-less finger
Deposited on 2004-05-22, released 2004-07-20
The last revision prior to the SCOP 1.73 freeze date was dated 2004-07-20, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.194
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nei endonuclease VIII-like 1
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q96FI4
      • see remark 999 (146)
      • see remark 999 (241)
    Domains in SCOP 1.73: d1tdha1, d1tdha2, d1tdha3
  • Heterogens: TRS, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1tdhA (A:)
mpegpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlil
splpgaqpqqeplalvfrfgmsgsfqlvpreelprhahlrfytappgprlalcfvdirrf
grwdlggkwqpgrgpcvlqeyqqfresvlrnladkafdrpicealldqrffngignylra
eilyrlkippfekarsvlealqqhrpspeltlsqkirtklqnpdllelchsvpkevvqlg
grgygsesgeedfaafrawlrcygmpgmsslqdrhgrtiwfqgdpgplapkgrksrkkks
katqlspedrvedalppskapsrtrrakrdlpkrkgrqaasghcrprkvkadipslepeg
tsas

    Sequence, based on observed residues (ATOM records): (download) 
    >1tdhA (A:)
pegpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlils
plpgaqpqqeplalvfrfgmsgsfqlvpreelprhahlrfytappgprlalcfvdirrfg
rwdlggkwqpgrgpcvlqeyqqfresvlrnladkafdrpicealldqrffngignylrae
ilyrlkippfekarsvlealqpeltlsqkirtklqnpdllelchsvpkevvqlggrgygs
esgeedfaafrawlrcygmpgmsslqdrhgrtiwfqgdpgplap