SCOPe 2.01: Structural Classification of Proteins

PDB entry 1tae

View 1tae on RCSB PDB site
Description: Structural rearrangement accompanying NAD+ synthesis within a bacterial DNA ligase crystal
Class: ligase
Keywords: Nucleotidyl transferase fold, LIGASE
Deposited on 2004-05-19, released 2004-11-23
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.204
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: DNA ligase, NAD-dependent
Species: Enterococcus faecalis [TaxId:226185]
Gene: ligA
Database cross-references and differences (RAF-indexed):
- Uniprot Q837V6 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
Domains in SCOPe 2.01: d1taea_
Chain 'B':
Compound: DNA ligase, NAD-dependent
Species: Enterococcus faecalis [TaxId:226185]
Gene: ligA
Database cross-references and differences (RAF-indexed):
- Uniprot Q837V6 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
Domains in SCOPe 2.01: d1taeb_
Chain 'C':
Compound: DNA ligase, NAD-dependent
Species: Enterococcus faecalis [TaxId:226185]
Gene: ligA
Database cross-references and differences (RAF-indexed):
- Uniprot Q837V6 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
Domains in SCOPe 2.01: d1taec_
Chain 'D':
Compound: DNA ligase, NAD-dependent
Species: Enterococcus faecalis [TaxId:226185]
Gene: ligA
Database cross-references and differences (RAF-indexed):
- Uniprot Q837V6 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
- GB NP_814472 (Start-322)
  - expression tag (274)
Domains in SCOPe 2.01: d1taed_
Heterogens: SO4, NA, NAD, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1taeA (A:)
meqqpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdli
tpdsptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelk
idglaislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympk
qsfvalneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktq
fealeelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqde
lgftvkaprwaiaykfppeeaetvlehhhhhh

Sequence, based on observed residues (ATOM records): (download)

>1taeA (A:)
qpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdlitpd
sptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelkidg
laislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympkqsf
valneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktqfea
leelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqdelgf
tvkaprwaiaykfppeeaetv

Chain 'B':
Sequence, based on SEQRES records: (download)

>1taeB (B:)
meqqpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdli
tpdsptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelk
idglaislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympk
qsfvalneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktq
fealeelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqde
lgftvkaprwaiaykfppeeaetvlehhhhhh

Sequence, based on observed residues (ATOM records): (download)

>1taeB (B:)
qpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdlitpd
sptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelkidg
laislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympkqsf
valneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktqfea
leelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqdelgf
tvkaprwaiaykfppeeaetv

Chain 'C':
Sequence, based on SEQRES records: (download)

>1taeC (C:)
meqqpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdli
tpdsptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelk
idglaislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympk
qsfvalneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktq
fealeelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqde
lgftvkaprwaiaykfppeeaetvlehhhhhh

Sequence, based on observed residues (ATOM records): (download)

>1taeC (C:)
qpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdlitpd
sptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelkidg
laislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympkqsf
valneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktqfea
leelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqdelgf
tvkaprwaiaykfppeeaetv

Chain 'D':
Sequence, based on SEQRES records: (download)

>1taeD (D:)
meqqpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdli
tpdsptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelk
idglaislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympk
qsfvalneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktq
fealeelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqde
lgftvkaprwaiaykfppeeaetvlehhhhhh

Sequence, based on observed residues (ATOM records): (download)

>1taeD (D:)
qpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdlitpd
sptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelkidg
laislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympkqsf
valneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktqfea
leelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqdelgf
tvkaprwaiaykfppeeaetv