PDB entry 1tae

View 1tae on RCSB PDB site
Description: Structural rearrangement accompanying NAD+ synthesis within a bacterial DNA ligase crystal
Class: ligase
Keywords: Nucleotidyl transferase fold
Deposited on 2004-05-19, released 2004-11-23
The last revision prior to the SCOP 1.73 freeze date was dated 2004-11-23, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.202
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA ligase, NAD-dependent
    Species: Enterococcus faecalis V583
    Gene: ligA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q837V6 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    Domains in SCOP 1.73: d1taea_
  • Chain 'B':
    Compound: DNA ligase, NAD-dependent
    Species: Enterococcus faecalis V583
    Gene: ligA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q837V6 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    Domains in SCOP 1.73: d1taeb_
  • Chain 'C':
    Compound: DNA ligase, NAD-dependent
    Species: Enterococcus faecalis V583
    Gene: ligA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q837V6 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    Domains in SCOP 1.73: d1taec_
  • Chain 'D':
    Compound: DNA ligase, NAD-dependent
    Species: Enterococcus faecalis V583
    Gene: ligA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q837V6 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    • GB NP_814472 (Start-322)
      • his tag (274)
    Domains in SCOP 1.73: d1taed_
  • Heterogens: SO4, NA, NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1taeA (A:)
meqqpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdli
tpdsptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelk
idglaislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympk
qsfvalneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktq
fealeelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqde
lgftvkaprwaiaykfppeeaetvlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1taeA (A:)
qpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdlitpd
sptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelkidg
laislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympkqsf
valneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktqfea
leelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqdelgf
tvkaprwaiaykfppeeaetv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1taeB (B:)
meqqpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdli
tpdsptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelk
idglaislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympk
qsfvalneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktq
fealeelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqde
lgftvkaprwaiaykfppeeaetvlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1taeB (B:)
qpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdlitpd
sptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelkidg
laislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympkqsf
valneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktqfea
leelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqdelgf
tvkaprwaiaykfppeeaetv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1taeC (C:)
meqqpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdli
tpdsptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelk
idglaislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympk
qsfvalneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktq
fealeelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqde
lgftvkaprwaiaykfppeeaetvlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1taeC (C:)
qpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdlitpd
sptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelkidg
laislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympkqsf
valneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktqfea
leelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqdelgf
tvkaprwaiaykfppeeaetv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1taeD (D:)
meqqpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdli
tpdsptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelk
idglaislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympk
qsfvalneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktq
fealeelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqde
lgftvkaprwaiaykfppeeaetvlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1taeD (D:)
qpltltaattraqelrkqlnqysheyyvkdqpsvedyvydrlykelvdietefpdlitpd
sptqrvggkvlsgfekaphdipmyslndgfskedifafdervrkaigkpvayccelkidg
laislryengvfvrgatrgdgtvgenitenlrtvrsvpmrltepisvevrgecympkqsf
valneereengqdifanprnaaagslrqldtkivakrnlntflytvadfgpmkaktqfea
leelsaigfrtnperqlcqsidevwayieeyhekrstlpyeidgivikvnefalqdelgf
tvkaprwaiaykfppeeaetv