PDB entry 1s97

View 1s97 on RCSB PDB site
Description: DPO4 with GT mismatch
Class: transferase/DNA
Keywords: protein-DNA complex, DNA duplex, g.t mismatch, transferase/DNA complex
Deposited on 2004-02-03, released 2004-04-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.218
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase IV
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: DBH, DPO4, SSO2448
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1s97a1, d1s97a2
  • Chain 'B':
    Compound: DNA polymerase IV
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: DBH, DPO4, SSO2448
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1s97b1, d1s97b2
  • Chain 'C':
    Compound: DNA polymerase IV
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: DBH, DPO4, SSO2448
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1s97c1, d1s97c2
  • Chain 'D':
    Compound: DNA polymerase IV
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: DBH, DPO4, SSO2448
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1s97d1, d1s97d2
  • Chain 'E':
    Compound: 5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap*cp*tp*g)-3'
  • Chain 'F':
    Compound: 5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap*cp*tp*g)-3'
  • Chain 'G':
    Compound: 5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap*cp*tp*g)-3'
  • Chain 'H':
    Compound: 5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap*cp*tp*g)-3'
  • Chain 'I':
    Compound: 5'-d(*t*tp*cp*ap*gp*tp*ap*gp*tp*cp*cp*tp*tp*cp*cp*cp*cp*c)-3'
  • Chain 'J':
    Compound: 5'-d(*t*tp*cp*ap*gp*tp*ap*gp*tp*cp*cp*tp*tp*cp*cp*cp*cp*c)-3'
  • Chain 'K':
    Compound: 5'-d(*t*tp*cp*ap*gp*tp*ap*gp*tp*cp*cp*tp*tp*cp*cp*cp*cp*c)-3'
  • Chain 'L':
    Compound: 5'-d(*t*tp*cp*ap*gp*tp*ap*gp*tp*cp*cp*tp*tp*cp*cp*cp*cp*c)-3'
  • Heterogens: CA, DCT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1s97A (A:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfieaigldkffdt

    Sequence, based on observed residues (ATOM records): (download) 
    >1s97A (A:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1s97B (B:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfieaigldkffdt

    Sequence, based on observed residues (ATOM records): (download) 
    >1s97B (B:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfi

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1s97C (C:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfieaigldkffdt

    Sequence, based on observed residues (ATOM records): (download) 
    >1s97C (C:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfi

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1s97D (D:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfieaigldkffdt

    Sequence, based on observed residues (ATOM records): (download) 
    >1s97D (D:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfi

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    No sequence available.