PDB entry 1s5y
View 1s5y on RCSB PDB site
Description: The crystal structure of Trematomus bernacchii hemoglobin oxidized by ferricyanide
Class: oxygen storage/transport
Keywords: Hemichrome, bis-histidine, oxidation, OXYGEN STORAGE/TRANSPORT COMPLEX
Deposited on
2004-01-22, released
2004-05-04
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.199
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hemoglobin alpha chain
Species: Trematomus bernacchii [TaxId:40690]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1s5ya_ - Chain 'B':
Compound: hemoglobin beta chain
Species: Trematomus bernacchii [TaxId:40690]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1s5yb_ - Chain 'C':
Compound: hemoglobin alpha chain
Species: Trematomus bernacchii [TaxId:40690]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1s5yc_ - Chain 'D':
Compound: hemoglobin beta chain
Species: Trematomus bernacchii [TaxId:40690]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1s5yd_ - Heterogens: HEM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1s5yA (A:)
slsdkdkaavralwskigksadaigndalsrmivvypqtktyfshwpdvtpgsphikahg
kkvmggialavskiddlktglmelseqhayklrvdpanfkilnhcilvvistmfpkeftp
eahvsldkflsgvalalaeryr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1s5yB (B:)
vewtdkersiisdifshmdyddigpkalsrclivypwtqrhfsgfgnlynaeaiignanv
aahgikvlhgldrgvknmdniaatyadlstlhseklhvdpdnfkllsdcitivlaakmgh
aftaetqgafqkflavvvsalgkqyh
Sequence, based on observed residues (ATOM records): (download)
>1s5yB (B:)
vewtdkersiisdifshmdyddigpkalsrclivypwtqrhfsgaiignanvaahgikvl
hgldrgvknmdniaatyadlstlhseklhvdpdnfkllsdcitivlaakmghaftaetqg
afqkflavvvsalgkq
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1s5yC (C:)
slsdkdkaavralwskigksadaigndalsrmivvypqtktyfshwpdvtpgsphikahg
kkvmggialavskiddlktglmelseqhayklrvdpanfkilnhcilvvistmfpkeftp
eahvsldkflsgvalalaeryr
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1s5yD (D:)
vewtdkersiisdifshmdyddigpkalsrclivypwtqrhfsgfgnlynaeaiignanv
aahgikvlhgldrgvknmdniaatyadlstlhseklhvdpdnfkllsdcitivlaakmgh
aftaetqgafqkflavvvsalgkqyh
Sequence, based on observed residues (ATOM records): (download)
>1s5yD (D:)
vewtdkersiisdifshmdyddigpkalsrclivypwtqrhfsgaiignanvaahgikvl
hgldrgvknmdniaatyadlstlhseklhvdpdnfkllsdcitivlaakmghaftaetqg
afqkflavvvsalgkq