PDB entry 1s3k
View 1s3k on RCSB PDB site
Description: Crystal Structure of a Humanized Fab (hu3S193) in Complex with the Lewis Y Tetrasaccharide
Class: immune system
Keywords: Immunoglobulin fold, Beta Barrel, Humanized antibody, Antigen binding fragment, IMMUNE SYSTEM
Deposited on
2004-01-13, released
2004-07-13
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-25.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.203
AEROSPACI score: -1.53
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: HU3S193 Fab fragment, heavy chain
Species: Mus musculus, Homo sapiens [TaxId:10090,9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1s3kh1, d1s3kh2 - Chain 'L':
Compound: HU3S193 Fab fragment, light chain
Species: Homo sapiens, Mus musculus [TaxId:9606,10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1s3kl1, d1s3kl2 - Heterogens: GOL, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>1s3kH (H:)
evqlvesgggvvqpgrslrlscstsgftfsdyymywvrqapgkglewvaymsnvgaitdy
pdtvkgrftisrdnskntlflqmdslrpedtgvyfcargtrdgswfaywgqgtpvtvssa
stkgpsvfplapsskstsggtaalgclvkdyfpqpvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc
Sequence, based on observed residues (ATOM records): (download)
>1s3kH (H:)
evqlvesgggvvqpgrslrlscstsgftfsdyymywvrqapgkglewvaymsnvgaitdy
pdtvkgrftisrdnskntlflqmdslrpedtgvyfcargtrdgswfaywgqgtpvtvssa
stkgpsvfplapgtaalgclvkdyfpqpvtvswnsgaltsgvhtfpavlqssglyslssv
vtvpssslgtqtyicnvnhkpsntkvdkkvep
- Chain 'L':
Sequence, based on SEQRES records: (download)
>1s3kL (L:)
diqmtqspsslsasvgdrvtitcrssqrivhsngntylewyqqtpgkapklliykvsnrf
sgvpsrfsgsgsgtdftftisslqpediatyycfqgshvpftfgqgtklqitrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>1s3kL (L:)
diqmtqspsslsasvgdrvtitcrssqrivhsngntylewyqqtpgkapklliykvsnrf
sgvpsrfsgsgsgtdftftisslqpediatyycfqgshvpftfgqgtklqitrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnr