PDB entry 1ry5
View 1ry5 on RCSB PDB site
Description: photosynthetic reaction center mutant from rhodobacter sphaeroides with asp l213 replaced with asn
Class: photosynthesis
Keywords: bacterial photosynthesis, rhodobacter sphaeroides, proton transfer pathway, revertant, integral membrane protein, photosynthesis
Deposited on
2003-12-19, released
2004-04-13
The last revision prior to the SCOPe 2.08 freeze date was dated
2012-04-25, with a file datestamp of
2012-04-20.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.211
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: reaction center protein h chain
Species: Rhodobacter sphaeroides [TaxId:1063]
Gene: puhA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1ry5h1, d1ry5h2 - Chain 'L':
Compound: reaction center protein l chain
Species: Rhodobacter sphaeroides [TaxId:1063]
Gene: pufL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1ry5l_ - Chain 'M':
Compound: reaction center protein m chain
Species: Rhodobacter sphaeroides [TaxId:1063]
Gene: pufM
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1ry5m_ - Heterogens: BCL, BPH, U10, GOL, FE2, PO4, SPO, LDA, CDL, K, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>1ry5H (H:)
mvgvtafgnfdlaslaiysfwiflagliyylqtenmregyplenedgtpaanqgpfplpk
pktfilphgrgtltvpgpesedrpialartavsegfphaptgdpmkdgvgpaswvarrdl
peldghghnkikpmkaaagfhvsagknpiglpvrgcdleiagkvvdiwvdipeqmarfle
velkdgstrllpmqmvkvqsnrvhvnalssdlfagiptiksptevtlleedkicgyvagg
lmyaapkrksvvaamlaeya
Sequence, based on observed residues (ATOM records): (download)
>1ry5H (H:)
dlaslaiysfwiflagliyylqtenmregyplenedgtpaanqgpfplpkpktfilphgr
gtltvpgpesedrpialartavsegfphaptgdpmkdgvgpaswvarrdlpeldghghnk
ikpmkaaagfhvsagknpiglpvrgcdleiagkvvdiwvdipeqmarflevelkdgstrl
lpmqmvkvqsnrvhvnalssdlfagiptiksptevtlleedkicgyvagglmyaapkrk
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1ry5L (L:)
allsferkyrvpggtlvggnlfdfwvgpfyvgffgvatfffaalgiiliawsavlqgtwn
pqlisvyppaleyglggaplakgglwqiiticatgafvswalreveicrklgigyhipfa
fafailayltlvlfrpvmmgawgyafpygiwthldwvsntgytygnfhynpahmiaisff
ftnalalalhgalvlsaanpekgkemrtpdhentffrdlvgysigtlgihrlglllslsa
vffsalcmiitgtiwfdqwvdwwqwwvklpwwanipgging
- Chain 'M':
Sequence, based on SEQRES records: (download)
>1ry5M (M:)
aeyqnifsqvqvrgpadlgmtedvnlanrsgvgpfstllgwfgnaqlgpiylgslgvlsl
fsglmwfftigiwfwyqagwnpavflrdlfffsleppapeyglsfaaplkegglwliasf
fmfvavwswwgrtylraqalgmgkhtawaflsaiwlwmvlgfirpilmgswseavpygif
shldwtnnfslvhgnlfynpfhglsiaflygsallfamhgatilavsrfggereleqiad
rgtaaeraalfwrwtmgfnatmegihrwaiwmavlvtltggigillsgtvvdnwyvwgqn
hgmapln
Sequence, based on observed residues (ATOM records): (download)
>1ry5M (M:)
aeyqnifsqvqvrgpadlgmtedvnlanrsgvgpfstllgwfgnaqlgpiylgslgvlsl
fsglmwfftigiwfwyqagwnpavflrdlfffsleppapeyglsfaaplkegglwliasf
fmfvavwswwgrtylraqalgmgkhtawaflsaiwlwmvlgfirpilmgswseavpygif
shldwtnnfslvhgnlfynpfhglsiaflygsallfamhgatilavsrfggereleqiad
rgtaaeraalfwrwtmgfnatmegihrwaiwmavlvtltggigillsgtvvdnwyvwgqn
h