SCOP 1.75: Structural Classification of Proteins

PDB entry 1rxo

View 1rxo on RCSB PDB site
Description: activated spinach rubisco in complex with its substrate ribulose-1,5-bisphosphate and calcium
Class: lyase (carbon-carbon)
Keywords: lyase (carbon-carbon)
Deposited on 1996-12-06, released 1997-06-16
The last revision prior to the SCOP 1.75 freeze date was dated 1997-06-16, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.205
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

Chain 'B':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea
Database cross-references and differences (RAF-indexed):
- Uniprot P00875
  - modified residue (200)
Domains in SCOP 1.75: d1rxob1, d1rxob2
Chain 'C':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOP 1.75: d1rxoc_
Chain 'E':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea
Database cross-references and differences (RAF-indexed):
- Uniprot P00875
  - modified residue (200)
Domains in SCOP 1.75: d1rxoe1, d1rxoe2
Chain 'F':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOP 1.75: d1rxof_
Chain 'H':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea
Database cross-references and differences (RAF-indexed):
- Uniprot P00875
  - modified residue (200)
Domains in SCOP 1.75: d1rxoh1, d1rxoh2
Chain 'I':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOP 1.75: d1rxoi_
Chain 'L':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea
Database cross-references and differences (RAF-indexed):
- Uniprot P00875
  - modified residue (200)
Domains in SCOP 1.75: d1rxol1, d1rxol2
Chain 'S':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOP 1.75: d1rxos_
Heterogens: RUB, CA, HOH

PDB Chain Sequences:

Chain 'B':
Sequence, based on SEQRES records: (download)

>1rxoB (B:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rxoB (B:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwk

Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)

>1rxoC (C:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy

Chain 'E':
Sequence, based on SEQRES records: (download)

>1rxoE (E:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rxoE (E:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwk

Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)

>1rxoF (F:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy

Chain 'H':
Sequence, based on SEQRES records: (download)

>1rxoH (H:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rxoH (H:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwk

Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)

>1rxoI (I:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy

Chain 'L':
Sequence, based on SEQRES records: (download)

>1rxoL (L:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rxoL (L:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwk

Chain 'S':
Sequence; same for both SEQRES and ATOM records: (download)

>1rxoS (S:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy