PDB entry 1rk5

View 1rk5 on RCSB PDB site
Description: The D-aminoacylase mutant D366A in complex with 100mM CuCl2
Class: Hydrolase
Keywords: TIM barrel, beta barrel, insertion, Hydrolase
Deposited on 2003-11-20, released 2004-04-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.183
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: D-aminoacylase
    Species: Alcaligenes faecalis [TaxId:511]
    Gene: DA1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9AGH8
      • engineered (378)
    Domains in SCOPe 2.07: d1rk5a1, d1rk5a2, d1rk5a3
  • Heterogens: ACT, ZN, CU, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1rk5A (A:)
    mrgshhhhhhgsmsqpdatpfdyilsggtvidgtnapgrladvgvrgdriaavgdlsass
    arrridvagkvvspgfidshthddnyllkhrdmtpkisqgvttvvtgncgislaplahan
    ppapldlldeggsfrfarfsdylealraappavnaacmvghstlraavmpdlrreatade
    iqamqaladdalasgaigistgafyppaahasteeiievcrplithggvyathmrdegeh
    ivqaleetfrigreldvpvvishhkvmgklnfgrsketlalieaamasqdvsldaypyva
    gstmlkqdrvllagrtlitwckpypelsgrdleeiaaergkskydvvpelqpagaiyfmm
    depdvqrilafgptmigsaglphderphprlwgtfprvlghysrdlglfpletavwkmtg
    ltaakfglaergqvqpgyyadlvvfdpatvadsatfehpteraagihsvyvngaavwedq
    sftgqhagrvlnraga
    

    Sequence, based on observed residues (ATOM records): (download)
    >1rk5A (A:)
    pfdyilsggtvidgtnapgrladvgvrgdriaavgdlsassarrridvagkvvspgfids
    hthddnyllkhrdmtpkisqgvttvvtgncgislaplahanppapldlldeggsfrfarf
    sdylealraappavnaacmvghstlraavmpdlrreatadeiqamqaladdalasgaigi
    stgafyppaahasteeiievcrplithggvyathmrdegehivqaleetfrigreldvpv
    vishhkvmgklnfgrsketlalieaamasqdvsldaypyvagstmlkqdrvllagrtlit
    wckpypelsgrdleeiaaergkskydvvpelqpagaiyfmmdepdvqrilafgptmigsa
    glphderphprlwgtfprvlghysrdlglfpletavwkmtgltaakfglaergqvqpgyy
    adlvvfdpatvadsatfehpteraagihsvyvngaavwedqsftgqhagrvlnr