PDB entry 1rih
View 1rih on RCSB PDB site
Description: Crystal Structure of Fab 14F7, a unique anti-tumor antibody specific for N-glycolyl GM3
Class: immune system
Keywords: Antibody, carbohydrate-binding Fab, specific for NeuGc-GM3, immunoglobulin, beta-sheet topology, IMMUNE SYSTEM
Deposited on
2003-11-17, released
2004-01-13
The last revision prior to the SCOPe 2.02 freeze date was dated
2010-02-16, with a file datestamp of
2010-02-12.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.181
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: heavy chain of antibody 14F7
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB AAQ83525 (0-124)
- GB AAA75163 (125-End)
Domains in SCOPe 2.02: d1rihh1, d1rihh2 - Chain 'L':
Compound: light chain of antibody 14F7
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB AAQ83524 (0-108)
- GB AAH31498 (109-End)
Domains in SCOPe 2.02: d1rihl1, d1rihl2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>1rihH (H:)
qvqlqqsgnelakpgasmkmscrasgysftsywihwlkqrpdqglewigyidpataytes
nqkfkdkailtadrssntafmylnsltsedsavyycaresprlrrgiyyyamdywgqgtt
vtvssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpa
vlqsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdcgckp
Sequence, based on observed residues (ATOM records): (download)
>1rihH (H:)
qvqlqqsgnelakpgasmkmscrasgysftsywihwlkqrpdqglewigyidpataytes
nqkfkdkailtadrssntafmylnsltsedsavyycaresprlrrgiyyyamdywgqgtt
vtvssakttppsvyplapgsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdl
ytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdc
- Chain 'L':
Sequence, based on SEQRES records: (download)
>1rihL (L:)
dlvltqspatlsvtpgdsvsfscrasqsisnnlhwyqqrthesprllikyasqsisgips
rfsgsgsgtdftlsissvetedfgmyfcqqsnrwpltfgagtklelkradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>1rihL (L:)
dlvltqspatlsvtpgdsvsfscrasqsisnnlhwyqqrthesprllikyasqsisgips
rfsgsgsgtdftlsissvetedfgmyfcqqsnrwpltfgagtklelkradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrn