SCOPe 2.01: Structural Classification of Proteins

PDB entry 1rco

View 1rco on RCSB PDB site
Description: spinach rubisco in complex with the inhibitor d-xylulose-2,2-diol-1,5-bisphosphate
Class: lyase
Keywords: lyase, carbon-carbon
Deposited on 1996-10-31, released 1997-03-12
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.239
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

Chain 'B':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00875 (Start-474)
Domains in SCOPe 2.01: d1rcob1, d1rcob2
Chain 'C':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOPe 2.01: d1rcoc_
Chain 'E':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00875 (Start-474)
Domains in SCOPe 2.01: d1rcoe1, d1rcoe2
Chain 'F':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOPe 2.01: d1rcof_
Chain 'H':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00875 (Start-474)
Domains in SCOPe 2.01: d1rcoh1, d1rcoh2
Chain 'I':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOPe 2.01: d1rcoi_
Chain 'K':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00875 (Start-474)
Domains in SCOPe 2.01: d1rcok1, d1rcok2
Chain 'L':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00875 (Start-474)
Domains in SCOPe 2.01: d1rcol1, d1rcol2
Chain 'M':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOPe 2.01: d1rcom_
Chain 'O':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00875 (Start-474)
Domains in SCOPe 2.01: d1rcoo1, d1rcoo2
Chain 'P':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOPe 2.01: d1rcop_
Chain 'R':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00875 (Start-474)
Domains in SCOPe 2.01: d1rcor1, d1rcor2
Chain 'S':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOPe 2.01: d1rcos_
Chain 'T':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOPe 2.01: d1rcot_
Chain 'V':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00875 (Start-474)
Domains in SCOPe 2.01: d1rcov1, d1rcov2
Chain 'W':
Compound: ribulose bisphosphate carboxylase/oxygenase
Species: Spinacia oleracea [TaxId:3562]
Database cross-references and differences (RAF-indexed):
- Uniprot P00870 (0-122)
  - conflict (1)
  - conflict (5-6)
  - conflict (8)
  - conflict (10)
  - conflict (108)
  - conflict (112)
Domains in SCOPe 2.01: d1rcow_
Heterogens: XDP, HOH

PDB Chain Sequences:

Chain 'B':
Sequence, based on SEQRES records: (download)

>1rcoB (B:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rcoB (B:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)

>1rcoC (C:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy

Chain 'E':
Sequence, based on SEQRES records: (download)

>1rcoE (E:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rcoE (E:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)

>1rcoF (F:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy

Chain 'H':
Sequence, based on SEQRES records: (download)

>1rcoH (H:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rcoH (H:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)

>1rcoI (I:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy

Chain 'K':
Sequence, based on SEQRES records: (download)

>1rcoK (K:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rcoK (K:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Chain 'L':
Sequence, based on SEQRES records: (download)

>1rcoL (L:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rcoL (L:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Chain 'M':
Sequence; same for both SEQRES and ATOM records: (download)

>1rcoM (M:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy

Chain 'O':
Sequence, based on SEQRES records: (download)

>1rcoO (O:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rcoO (O:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Chain 'P':
Sequence; same for both SEQRES and ATOM records: (download)

>1rcoP (P:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy

Chain 'R':
Sequence, based on SEQRES records: (download)

>1rcoR (R:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rcoR (R:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Chain 'S':
Sequence; same for both SEQRES and ATOM records: (download)

>1rcoS (S:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy

Chain 'T':
Sequence; same for both SEQRES and ATOM records: (download)

>1rcoT (T:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy

Chain 'V':
Sequence, based on SEQRES records: (download)

>1rcoV (V:)
mspqtetkasvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaae
sstgtwttvwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsi
vgnvfgfkalralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghyl
natagtcedmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhav
idrqknhgmhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsr
giyftqswvstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavan
rvaleacvqarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Sequence, based on observed residues (ATOM records): (download)

>1rcoV (V:)
asvgfkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfcaealykaqaetgeikghylnatagtce
dmmkravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhg
mhfrvlakalrlsggdhihsgtvvgklegerditlgfvdllrddytekdrsrgiyftqsw
vstpgvlpvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacv
qarnegrdlaregntiireatkwspelaaacevwkeikfefpamdtv

Chain 'W':
Sequence; same for both SEQRES and ATOM records: (download)

>1rcoW (W:)
mqvwpilnlkkyetlsylpplttdqlarqvdyllnnkwvpclefetdhgfvyrehhnspg
yydgrywtmwklpmfgctdpaqvlneleeckkeypnafiriigfdsnrevqcisfiaykp
agy