PDB entry 1rc8
View 1rc8 on RCSB PDB site
Description: T4 Polynucleotide Kinase bound to 5'-GTCAC-3' ssDNA
Class: transferase/DNA
Keywords: KINASE, PHOSPHATASE, ALPHA/BETA, P-LOOP, ssDNA, TRANSFERASE/DNA COMPLEX
Deposited on
2003-11-03, released
2004-02-17
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: 0.23
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Polynucleotide kinase
Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
Gene: pseT
Database cross-references and differences (RAF-indexed):
- Uniprot P06855 (0-300)
- modified residue (0)
- modified residue (41)
- modified residue (62)
- modified residue (138)
- modified residue (142)
- modified residue (172)
- modified residue (191)
- modified residue (198)
- modified residue (202)
- modified residue (226)
- modified residue (241)
- modified residue (284)
Domains in SCOPe 2.06: d1rc8a1, d1rc8a2 - Chain 'B':
Compound: 5'-d(*gp*tp*cp*ap*c)-3'
- Heterogens: CA, DMS, ADP, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1rc8A (A:)
mkkiiltigcpgsgkstwarefiaknpgfyninrddyrqsimaheerdeykytkkkegiv
tgmqfdtaksilyggdsvkgviisdtnlnperrlawetfakeygwkvehkvfdvpwtelv
krnskrgtkavpidvlrsmyksmreylglpvyngtpgkpkavifdvdgtlakmngrgpyd
lekcdtdvinpmvvelskmyalmgyqivvvsgresgtkedptkyyrmtrkwvediagvpl
vmqcqreqgdtrkddvvkeeifwkhiaphfdvklaiddrtqvvemwrrigvecwqvasgd
f
Sequence, based on observed residues (ATOM records): (download)
>1rc8A (A:)
mkkiiltigcpgsgkstwarefiaknpgfyninrddyrqsimaheerdeykytkkkegiv
tgmqfdtaksilyggdsvkgviisdtnlnperrlawetfakeygwkvehkvfdvpwtelv
krnskrgtkavpidvlrsmyksmreylglpvyngtpgkpkavifdvdgtlakmtdvinpm
vvelskmyalmgyqivvvsgresgtkedptkyyrmtrkwvediagvplvmqcqreqgdtr
kddvvkeeifwkhiaphfdvklaiddrtqvvemwrrigvecwqvasgdf
- Chain 'B':
No sequence available.