SCOPe 2.02: Structural Classification of Proteins

PDB entry 1r4n

View 1r4n on RCSB PDB site
Description: APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex with ATP
Class: cell cycle
Keywords: cell cycle
Deposited on 2003-10-07, released 2003-12-23
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.6 Å
R-factor: 0.251
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: amyloid beta precursor protein-binding protein 1
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q13564 (Start-528)
Domains in SCOPe 2.02: d1r4na_
Chain 'B':
Compound: ubiquitin-activating enzyme E1C
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8TBC4 (0-End)
  - engineered (138)
Domains in SCOPe 2.02: d1r4nb_
Chain 'C':
Compound: amyloid beta precursor protein-binding protein 1
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q13564 (Start-528)
Domains in SCOPe 2.02: d1r4nc_
Chain 'D':
Compound: ubiquitin-activating enzyme E1C
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8TBC4 (0-End)
  - engineered (138)
Domains in SCOPe 2.02: d1r4nd_
Chain 'E':
Compound: amyloid beta precursor protein-binding protein 1
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q13564 (Start-528)
Domains in SCOPe 2.02: d1r4ne_
Chain 'F':
Compound: ubiquitin-activating enzyme E1C
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8TBC4 (0-End)
  - engineered (138)
Domains in SCOPe 2.02: d1r4nf_
Chain 'G':
Compound: amyloid beta precursor protein-binding protein 1
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q13564 (Start-528)
Domains in SCOPe 2.02: d1r4ng_
Chain 'H':
Compound: ubiquitin-activating enzyme E1C
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8TBC4 (0-End)
  - engineered (138)
Domains in SCOPe 2.02: d1r4nh_
Chain 'I':
Compound: Ubiquitin-like protein NEDD8
Species: Homo sapiens [TaxId:9606]
Gene: NEDD8
Database cross-references and differences (RAF-indexed):
- Uniprot Q15843 (0-75)
Domains in SCOPe 2.02: d1r4ni_
Chain 'J':
Compound: Ubiquitin-like protein NEDD8
Species: Homo sapiens [TaxId:9606]
Gene: NEDD8
Database cross-references and differences (RAF-indexed):
- Uniprot Q15843 (0-75)
Domains in SCOPe 2.02: d1r4nj_
Chain 'K':
Compound: Ubiquitin-like protein NEDD8
Species: Homo sapiens [TaxId:9606]
Gene: NEDD8
Database cross-references and differences (RAF-indexed):
- Uniprot Q15843 (0-75)
Domains in SCOPe 2.02: d1r4nk_
Chain 'L':
Compound: Ubiquitin-like protein NEDD8
Species: Homo sapiens [TaxId:9606]
Gene: NEDD8
Database cross-references and differences (RAF-indexed):
- Uniprot Q15843 (0-75)
Domains in SCOPe 2.02: d1r4nl_
Heterogens: ZN, ATP

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1r4nA (A:)
maqlgkllkeqkydrqlrlwgdhgqealesahvclinatatgteilknlvlpgigsftii
dgnqvsgedagnnfflqrssigknraeaameflqelnsdvsgsfveespenlldndpsff
crftvvvatqlpestslrladvlwnsqipllicrtyglvgymriiikehpvieshpdnal
edlrldkpfpelrehfqsydldhmekkdhshtpwiviiakylaqwysetngripktykek
edfrdlirqgilkpedeenfeeaiknvntalnttqipssiedifnddrcinitkqtpsfw
ilaralkefvakegqgnlpvrgtipdmiadsgkyiklqnvyrekakkdaaavgnhvakll
qsigqapesisekelkllcsnsaflrvvrcrslaeeygldtinkdeiissmdnpdneivl
ylmlravdrfhkqqgrypgvsnyqveedigklkscltgflqeyglsvmvkddyvhefcry
gaaephtiaaflggaaaqevikiitkqfvifnntyiysgmsqtsatfql