PDB entry 1qyu
View 1qyu on RCSB PDB site
Description: Structure of the catalytic domain of 23S rRNA pseudouridine synthase RluD
Class: lyase
Keywords: catalytic domain, rlud, pseudouridine synthase, lyase
Deposited on
2003-09-12, released
2003-12-09
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-19.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.219
AEROSPACI score: 0.43
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ribosomal large subunit pseudouridine synthase D
Species: Escherichia coli [TaxId:562]
Gene: RLUD
Database cross-references and differences (RAF-indexed):
- Uniprot P33643 (Start-348)
- modified residue (168)
- modified residue (201)
- modified residue (221)
- modified residue (237)
- modified residue (262)
- modified residue (305)
- modified residue (317)
- modified residue (327)
- modified residue (334)
Domains in SCOPe 2.08: d1qyua_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1qyuA (A:)
mgsshhhhhhssglvprgshmasmaqrvqltatvsenqlgqrldqalaemfpdysrsrik
ewildqrvlvngkvcdkpkekvlggeqvainaeieeearfepqdipldivyedediiiin
kprdlvvhpgagnpdgtvlnallhyyppiadvpragivhrldkdttglmvvaktvpaqtr
lveslqrreitreyeavaighmtaggtvdepisrhptkrthmavhpmgkpavthyrimeh
frvhtrlrlrletgrthqirvhmahithplvgdpvyggrprppkgaseafistlrkfdrq
alhatmlrlyhpisgiemewhapipqdmvelievmradfeehkdevdwl
Sequence, based on observed residues (ATOM records): (download)
>1qyuA (A:)
fepqdipldivyedediiiinkprdlvvhpgagnpdgtvlnallhyyppiadvpragivh
rldkdttglmvvaktvpaqtrlveslqrreitreyeavaighmtaggtvdepisrhptkr
thmavhpmgkpavthyrimehfrvhtrlrlrletgrthqirvhmahithplvgdpvyggr
prppkgaseafistlrkfdrqalhatmlrlyhpisgiemewhapipqdmvelievmradf
eehkdevdwl