PDB entry 1qu4

View 1qu4 on RCSB PDB site
Description: crystal structure of trypanosoma brucei ornithine decarboxylase
Class: lyase
Keywords: polyamine metabolism, pyridoxal 5'-phosphate, alpha-beta barrel, lyase
Deposited on 1999-07-06, released 1999-11-17
The last revision prior to the SCOPe 2.02 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.245
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ornithine decarboxylase
    Species: Trypanosoma brucei [TaxId:5691]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1qu4a1, d1qu4a2
  • Chain 'B':
    Compound: ornithine decarboxylase
    Species: Trypanosoma brucei [TaxId:5691]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1qu4b1, d1qu4b2
  • Chain 'C':
    Compound: ornithine decarboxylase
    Species: Trypanosoma brucei [TaxId:5691]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1qu4c1, d1qu4c2
  • Chain 'D':
    Compound: ornithine decarboxylase
    Species: Trypanosoma brucei [TaxId:5691]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1qu4d1, d1qu4d2
  • Heterogens: PLP

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1qu4A (A:)
gamdivvnddlscrflegfntrdalckkismntcdegdpffvadlgdivrkhetwkkclp
rvtpfyavkcnddwrvlgtlaalgtgfdcasnteiqrvrgigvppekiiyanpckqishi
ryardsgvdvmtfdcvdelekvakthpkakmvlristddslarcrlsvkfgakvedcrfi
leqakklnidvtgvsfhvgsgstdastfaqaisdsrfvfdmgtelgfnmhildigggfpg
trdaplkfeeiagvinnalekhfppdlkltivaepgryyvasaftlavnviakkvtpgvq
tdvgahaesnaqsfmyyvndgvygsfncilydhavvrplpqrepipneklypssvwgptc
dgldqiveryylpemqvgewllfedmgaytvvgtssfngfqsptiyyvvsglpdhvvrel
ksqks

    Sequence, based on observed residues (ATOM records): (download) 
    >1qu4A (A:)
degdpffvadlgdivrkhetwkkclprvtpfyavkcnddwrvlgtlaalgtgfdcasnte
iqrvrgigvppekiiyanpckqishiryardsgvdvmtfdcvdelekvakthpkakmvlr
istlsvkfgakvedcrfileqakklnidvtgvsfhvgsgstdastfaqaisdsrfvfdmg
telgfnmhildigggfpgtrdaplkfeeiagvinnalekhfppdlkltivaepgryyvas
aftlavnviakkvtpaqsfmyyvndgvygsfncilydhavvrplpqrepipneklypssv
wgptcdgldqiveryylpemqvgewllfedmgaytvvgtssfngfqsptiyyvvsg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1qu4B (B:)
gamdivvnddlscrflegfntrdalckkismntcdegdpffvadlgdivrkhetwkkclp
rvtpfyavkcnddwrvlgtlaalgtgfdcasnteiqrvrgigvppekiiyanpckqishi
ryardsgvdvmtfdcvdelekvakthpkakmvlristddslarcrlsvkfgakvedcrfi
leqakklnidvtgvsfhvgsgstdastfaqaisdsrfvfdmgtelgfnmhildigggfpg
trdaplkfeeiagvinnalekhfppdlkltivaepgryyvasaftlavnviakkvtpgvq
tdvgahaesnaqsfmyyvndgvygsfncilydhavvrplpqrepipneklypssvwgptc
dgldqiveryylpemqvgewllfedmgaytvvgtssfngfqsptiyyvvsglpdhvvrel
ksqks

    Sequence, based on observed residues (ATOM records): (download) 
    >1qu4B (B:)
degdpffvadlgdivrkhetwkkclprvtpfyavkcnddwrvlgtlaalgtgfdcasnte
iqrvrgigvppekiiyanpckqishiryardsgvdvmtfdcvdelekvakthpkakmvlr
istlsvkfgakvedcrfileqakklnidvtgvsfhvgsgstdastfaqaisdsrfvfdmg
telgfnmhildigggfpgtrdaplkfeeiagvinnalekhfppdlkltivaepgryyvas
aftlavnviakkvtpaqsfmyyvndgvygsfncilydhavvrplpqrepipneklypssv
wgptcdgldqiveryylpemqvgewllfedmgaytvvgtssfngfqsptiyyvvsg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1qu4C (C:)
gamdivvnddlscrflegfntrdalckkismntcdegdpffvadlgdivrkhetwkkclp
rvtpfyavkcnddwrvlgtlaalgtgfdcasnteiqrvrgigvppekiiyanpckqishi
ryardsgvdvmtfdcvdelekvakthpkakmvlristddslarcrlsvkfgakvedcrfi
leqakklnidvtgvsfhvgsgstdastfaqaisdsrfvfdmgtelgfnmhildigggfpg
trdaplkfeeiagvinnalekhfppdlkltivaepgryyvasaftlavnviakkvtpgvq
tdvgahaesnaqsfmyyvndgvygsfncilydhavvrplpqrepipneklypssvwgptc
dgldqiveryylpemqvgewllfedmgaytvvgtssfngfqsptiyyvvsglpdhvvrel
ksqks

    Sequence, based on observed residues (ATOM records): (download) 
    >1qu4C (C:)
degdpffvadlgdivrkhetwkkclprvtpfyavkcnddwrvlgtlaalgtgfdcasnte
iqrvrgigvppekiiyanpckqishiryardsgvdvmtfdcvdelekvakthpkakmvlr
istlsvkfgakvedcrfileqakklnidvtgvsfhvgsgstdastfaqaisdsrfvfdmg
telgfnmhildigggfpgtrdaplkfeeiagvinnalekhfppdlkltivaepgryyvas
aftlavnviakkvtpaqsfmyyvndgvygsfncilydhavvrplpqrepipneklypssv
wgptcdgldqiveryylpemqvgewllfedmgaytvvgtssfngfqsptiyyvvsg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1qu4D (D:)
gamdivvnddlscrflegfntrdalckkismntcdegdpffvadlgdivrkhetwkkclp
rvtpfyavkcnddwrvlgtlaalgtgfdcasnteiqrvrgigvppekiiyanpckqishi
ryardsgvdvmtfdcvdelekvakthpkakmvlristddslarcrlsvkfgakvedcrfi
leqakklnidvtgvsfhvgsgstdastfaqaisdsrfvfdmgtelgfnmhildigggfpg
trdaplkfeeiagvinnalekhfppdlkltivaepgryyvasaftlavnviakkvtpgvq
tdvgahaesnaqsfmyyvndgvygsfncilydhavvrplpqrepipneklypssvwgptc
dgldqiveryylpemqvgewllfedmgaytvvgtssfngfqsptiyyvvsglpdhvvrel
ksqks

    Sequence, based on observed residues (ATOM records): (download) 
    >1qu4D (D:)
degdpffvadlgdivrkhetwkkclprvtpfyavkcnddwrvlgtlaalgtgfdcasnte
iqrvrgigvppekiiyanpckqishiryardsgvdvmtfdcvdelekvakthpkakmvlr
istlsvkfgakvedcrfileqakklnidvtgvsfhvgsgstdastfaqaisdsrfvfdmg
telgfnmhildigggfpgtrdaplkfeeiagvinnalekhfppdlkltivaepgryyvas
aftlavnviakkvtpaqsfmyyvndgvygsfncilydhavvrplpqrepipneklypssv
wgptcdgldqiveryylpemqvgewllfedmgaytvvgtssfngfqsptiyyvvsg