PDB entry 1qty

View 1qty on RCSB PDB site
Description: vascular endothelial growth factor in complex with domain 2 of the flt-1 receptor
Class: hormone/growth factor receptor
Keywords: complex (growth factor/receptor), flt-1, vegf receptor, receptor tyrosine kinase, cystine knot, glycoprotein, immunoglobulin-like domain, I-set, hormone/growth factor receptor
Deposited on 1999-06-29, released 2000-01-12
The last revision prior to the SCOP 1.75 freeze date was dated 2000-04-19, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.233
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'R':
    Compound: vascular endothelial growth factor
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1qtyr_
  • Chain 'S':
    Compound: vascular endothelial growth factor
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1qtys_
  • Chain 'T':
    Compound: fms-like tyrosine kinase 1
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1qtyt_
  • Chain 'U':
    Compound: fms-like tyrosine kinase 1
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1qtyu_
  • Chain 'V':
    Compound: vascular endothelial growth factor
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1qtyv_
  • Chain 'W':
    Compound: vascular endothelial growth factor
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1qtyw_
  • Chain 'X':
    Compound: fms-like tyrosine kinase 1
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1qtyx_
  • Chain 'Y':
    Compound: fms-like tyrosine kinase 1
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1qtyy_

PDB Chain Sequences:

  • Chain 'R':
    Sequence, based on SEQRES records: (download)
    >1qtyR (R:)
    gqnhhevvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndegle
    cvpteesnitmqimrikphqgqhigemsflqhnkcecrpkkd
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qtyR (R:)
    evvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndeglecvpte
    esnitmqimrikphqgqhigemsflqhnkcecrpk
    

  • Chain 'S':
    Sequence, based on SEQRES records: (download)
    >1qtyS (S:)
    gqnhhevvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndegle
    cvpteesnitmqimrikphqgqhigemsflqhnkcecrpkkd
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qtyS (S:)
    evvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndeglecvpte
    esnitmqimrikphqgqhigemsflqhnkcecrpkk
    

  • Chain 'T':
    Sequence, based on SEQRES records: (download)
    >1qtyT (T:)
    sdtgrpfvemyseipeiihmtegrelvipcrvtspnitvtlkkfpldtlipdgkriiwds
    rkgfiisnatykeiglltceatvnghlyktnylthrqtnti
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qtyT (T:)
    grpfvemyseipeiihmtegrelvipcrvtspnitvtlkkfpldtlipdgkriiwdsrkg
    fiisnatykeiglltceatvnghlyktnylthrq
    

  • Chain 'U':
    Sequence, based on SEQRES records: (download)
    >1qtyU (U:)
    sdtgrpfvemyseipeiihmtegrelvipcrvtspnitvtlkkfpldtlipdgkriiwds
    rkgfiisnatykeiglltceatvnghlyktnylthrqtnti
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qtyU (U:)
    grpfvemyseipeiihmtegrelvipcrvtspnitvtlkkfpldtlipdgkriiwdsrkg
    fiisnatykeiglltceatvnghlyktnylthrq
    

  • Chain 'V':
    Sequence, based on SEQRES records: (download)
    >1qtyV (V:)
    gqnhhevvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndegle
    cvpteesnitmqimrikphqgqhigemsflqhnkcecrpkkd
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qtyV (V:)
    evvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndeglecvpte
    esnitmqimrikphqgqhigemsflqhnkcecrpk
    

  • Chain 'W':
    Sequence, based on SEQRES records: (download)
    >1qtyW (W:)
    gqnhhevvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndegle
    cvpteesnitmqimrikphqgqhigemsflqhnkcecrpkkd
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qtyW (W:)
    evvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndeglecvpte
    esnitmqimrikphqgqhigemsflqhnkcecrpk
    

  • Chain 'X':
    Sequence, based on SEQRES records: (download)
    >1qtyX (X:)
    sdtgrpfvemyseipeiihmtegrelvipcrvtspnitvtlkkfpldtlipdgkriiwds
    rkgfiisnatykeiglltceatvnghlyktnylthrqtnti
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qtyX (X:)
    grpfvemyseipeiihmtegrelvipcrvtspnitvtlkkfpldtlipdgkriiwdsrkg
    fiisnatykeiglltceatvnghlyktnylthrq
    

  • Chain 'Y':
    Sequence, based on SEQRES records: (download)
    >1qtyY (Y:)
    sdtgrpfvemyseipeiihmtegrelvipcrvtspnitvtlkkfpldtlipdgkriiwds
    rkgfiisnatykeiglltceatvnghlyktnylthrqtnti
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qtyY (Y:)
    grpfvemyseipeiihmtegrelvipcrvtspnitvtlkkfpldtlipdgkriiwdsrkg
    fiisnatykeiglltceatvnghlyktnylthrq