PDB entry 1qfo
View 1qfo on RCSB PDB site
Description: n-terminal domain of sialoadhesin (mouse) in complex with 3'sialyllactose
Class: immune system
Keywords: immunoglobulin superfamily, carbohydrate binding, immune system
Deposited on
1999-04-12, released
1999-04-16
The last revision prior to the SCOPe 2.01 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.2
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein (sialoadhesin)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d1qfoa_ - Chain 'B':
Compound: protein (sialoadhesin)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d1qfob_ - Chain 'C':
Compound: protein (sialoadhesin)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d1qfoc_ - Heterogens: SIA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1qfoA (A:)
twgvsspknvqglsgscllipcifsypadvpvsngitaiwyydysgkrqvvihsgdpklv
dkrfrgraelmgnmdhkvcnlllkdlkpedsgtynfrfeisdsnrwldvkgttvtvttd
Sequence, based on observed residues (ATOM records): (download)
>1qfoA (A:)
twgvsspknvqglsgscllipcifsypadvpvgitaiwyydysgkrqvvihsgdpklvdk
rfrgraelmgnmdhkvcnlllkdlkpedsgtynfrfeissnrwldvkgttvtvtt
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1qfoB (B:)
twgvsspknvqglsgscllipcifsypadvpvsngitaiwyydysgkrqvvihsgdpklv
dkrfrgraelmgnmdhkvcnlllkdlkpedsgtynfrfeisdsnrwldvkgttvtvttd
Sequence, based on observed residues (ATOM records): (download)
>1qfoB (B:)
twgvsspknvqglsgscllipcifsypadvpvsgitaiwyydysgkrqvvihsgdpklvd
krfrgraelmgnmdhkvcnlllkdlkpedsgtynfrfeissnrwldvkgttvtvtt
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1qfoC (C:)
twgvsspknvqglsgscllipcifsypadvpvsngitaiwyydysgkrqvvihsgdpklv
dkrfrgraelmgnmdhkvcnlllkdlkpedsgtynfrfeisdsnrwldvkgttvtvttd
Sequence, based on observed residues (ATOM records): (download)
>1qfoC (C:)
twgvsspknvqglsgscllipcifsypadvpgitaiwyydysgkrqvvihsgdpklvdkr
frgraelmgnmdhkvcnlllkdlkpedsgtynfrfeisnrwldvkgttvtvttd