PDB entry 1q9v
View 1q9v on RCSB PDB site
Description: S25-2- Kdo monosaccharide complex
Class: immune system
Keywords: antigen-binding fragment, Fab, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, Kdo, protein-carbohydrate complex
Deposited on
2003-08-25, released
2004-01-27
The last revision prior to the SCOP 1.73 freeze date was dated
2004-01-27, with a file datestamp of
2007-06-28.
Experiment type: XRAY
Resolution: 1.73 Å
R-factor: 0.202
AEROSPACI score: 0.52
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: S25-2 Fab (IgG1k) light chain
Species: MUS MUSCULUS
Domains in SCOP 1.73: d1q9va1, d1q9va2 - Chain 'B':
Compound: S25-2 Fab (IgG1k) heavy chain
Species: MUS MUSCULUS
Domains in SCOP 1.73: d1q9vb1, d1q9vb2 - Heterogens: KDO, MG, ZN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1q9vA (A:)
divmsqspsslavsagekvtmsckssqsllnsrtrknylawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltitsvqaedlavyyckqsynlrtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrnec
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1q9vB (B:)
evklvesggglvqsggslrlscatsgftftdyymswvrqppgkalewlgfirnkangytt
eyspsvkgrftisrdnsqsilylqmntlraedsatyycardhdgyyerfsywgqgtlvtv
saakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlq
sdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivpr