PDB entry 1pyb
View 1pyb on RCSB PDB site
Description: Crystal Structure of Aquifex aeolicus Trbp111: a Structure-Specific tRNA Binding Protein
Class: RNA binding protein
Keywords: oligonucleotide, oligosaccharide-binding fold, OB-fold, beta-barrel, RNA BINDING PROTEIN
Deposited on
2003-07-08, released
2003-08-05
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-09-02, with a file datestamp of
2020-08-28.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: tRNA-binding protein Trbp111
Species: Aquifex aeolicus [TaxId:63363]
Gene: metG
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1pyba_ - Chain 'B':
Compound: tRNA-binding protein Trbp111
Species: Aquifex aeolicus [TaxId:63363]
Gene: metG
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1pybb_ - Chain 'C':
Compound: tRNA-binding protein Trbp111
Species: Aquifex aeolicus [TaxId:63363]
Gene: metG
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1pybc_ - Chain 'D':
Compound: tRNA-binding protein Trbp111
Species: Aquifex aeolicus [TaxId:63363]
Gene: metG
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1pybd_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1pybA (A:)
meekaligiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpee
lvgkkivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegakls
Sequence, based on observed residues (ATOM records): (download)
>1pybA (A:)
aligiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpeelvgk
kivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegakls
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1pybB (B:)
meekaligiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpee
lvgkkivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegakls
Sequence, based on observed residues (ATOM records): (download)
>1pybB (B:)
aligiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpeelvgk
kivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegakls
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1pybC (C:)
meekaligiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpee
lvgkkivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegakls
Sequence, based on observed residues (ATOM records): (download)
>1pybC (C:)
aligiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpeelvgk
kivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegakls
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1pybD (D:)
meekaligiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpee
lvgkkivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegakls
Sequence, based on observed residues (ATOM records): (download)
>1pybD (D:)
aligiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpeelvgk
kivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegakls