PDB entry 1ped

View 1ped on RCSB PDB site
Description: bacterial secondary alcohol dehydrogenase (apo-form)
Class: oxidoreductase
Keywords: thermostable, oxidoreductase, zinc, nadp
Deposited on 1995-12-28, released 1997-07-07
The last revision prior to the SCOP 1.73 freeze date was dated 1997-07-07, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.215
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NADP-dependent alcohol dehydrogenase
    Species: Clostridium beijerinckii
    Database cross-references and differences (RAF-indexed):
    • Uniprot P25984 (0-350)
      • conflict (153)
      • conflict (233)
    Domains in SCOP 1.73: d1peda1, d1peda2
  • Chain 'B':
    Compound: NADP-dependent alcohol dehydrogenase
    Species: Clostridium beijerinckii
    Database cross-references and differences (RAF-indexed):
    • Uniprot P25984 (0-350)
      • conflict (153)
      • conflict (233)
    Domains in SCOP 1.73: d1pedb1, d1pedb2
  • Chain 'C':
    Compound: NADP-dependent alcohol dehydrogenase
    Species: Clostridium beijerinckii
    Database cross-references and differences (RAF-indexed):
    • Uniprot P25984 (0-350)
      • conflict (153)
      • conflict (233)
    Domains in SCOP 1.73: d1pedc1, d1pedc2
  • Chain 'D':
    Compound: NADP-dependent alcohol dehydrogenase
    Species: Clostridium beijerinckii
    Database cross-references and differences (RAF-indexed):
    • Uniprot P25984 (0-350)
      • conflict (153)
      • conflict (233)
    Domains in SCOP 1.73: d1pedd1, d1pedd2
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pedA (A:)
mkgfamlginklgwiekerpvagsydaivrplavspctsdihtvfegalgdrknmilghe
avgevvevgsevkdfkpgdrvivpcttpdwrslevqagfqqhsngmlagwkfsnfkdgvf
geyfhvndadmnlailpkdmplenavmitdmmttgfhgaeladiqmgssvvvigigavgl
mgiagaklrgagriigvgsrpicveaakfygatdilnyknghivdqvmkltngkgvdrvi
magggsetlsqavsmvkpggiisninyhgsgdalliprvewgcgmahktikgglcpggrl
raemlrdmvvynrvdlsklvthvyhgfdhieealllmkdkpkdlikavvil

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pedB (B:)
mkgfamlginklgwiekerpvagsydaivrplavspctsdihtvfegalgdrknmilghe
avgevvevgsevkdfkpgdrvivpcttpdwrslevqagfqqhsngmlagwkfsnfkdgvf
geyfhvndadmnlailpkdmplenavmitdmmttgfhgaeladiqmgssvvvigigavgl
mgiagaklrgagriigvgsrpicveaakfygatdilnyknghivdqvmkltngkgvdrvi
magggsetlsqavsmvkpggiisninyhgsgdalliprvewgcgmahktikgglcpggrl
raemlrdmvvynrvdlsklvthvyhgfdhieealllmkdkpkdlikavvil

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pedC (C:)
mkgfamlginklgwiekerpvagsydaivrplavspctsdihtvfegalgdrknmilghe
avgevvevgsevkdfkpgdrvivpcttpdwrslevqagfqqhsngmlagwkfsnfkdgvf
geyfhvndadmnlailpkdmplenavmitdmmttgfhgaeladiqmgssvvvigigavgl
mgiagaklrgagriigvgsrpicveaakfygatdilnyknghivdqvmkltngkgvdrvi
magggsetlsqavsmvkpggiisninyhgsgdalliprvewgcgmahktikgglcpggrl
raemlrdmvvynrvdlsklvthvyhgfdhieealllmkdkpkdlikavvil

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pedD (D:)
mkgfamlginklgwiekerpvagsydaivrplavspctsdihtvfegalgdrknmilghe
avgevvevgsevkdfkpgdrvivpcttpdwrslevqagfqqhsngmlagwkfsnfkdgvf
geyfhvndadmnlailpkdmplenavmitdmmttgfhgaeladiqmgssvvvigigavgl
mgiagaklrgagriigvgsrpicveaakfygatdilnyknghivdqvmkltngkgvdrvi
magggsetlsqavsmvkpggiisninyhgsgdalliprvewgcgmahktikgglcpggrl
raemlrdmvvynrvdlsklvthvyhgfdhieealllmkdkpkdlikavvil