PDB entry 1odu

View 1odu on RCSB PDB site
Description: crystal structure of thermotoga maritima alpha-fucosidase in complex with fucose
Class: hydrolase
Keywords: hydrolase, glycoside hydrolase, alpha-l-fucosidase, product complex, thermostable
Deposited on 2003-03-14, released 2004-01-15
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-31.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.203
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative alpha-l-fucosidase
    Species: THERMOTOGA MARITIMA [TaxId:243274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1odua1, d1odua2
  • Chain 'B':
    Compound: putative alpha-l-fucosidase
    Species: THERMOTOGA MARITIMA [TaxId:243274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1odub1, d1odub2
  • Heterogens: FUL

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1oduA (A:)
mismkprykpdweslrehtvpkwfdkakfgifihwgiysvpgwatptgelgkvpmdawff
qnpyaewyenslrikesptweyhvktygenfeyekfadlftaekwdpqewadlfkkagak
yvipttkhhdgfclwgtkytdfnsvkrgpkrdlvgdlakavreaglrfgvyysggldwrf
ttepirypedlsyirpntyeyadyaykqvmelvdlylpdvlwndmgwpekgkedlkylfa
yyynkhpegsvndrwgvphwdfktaeyhvnypgdlpgykweftrgiglsfgynrnegpeh
mlsveqlvytlvdvvskggnlllnvgpkgdgtipdlqkerllglgewlrkygdaiygtsv
werccaktedgteirftrkcnrifviflgiptgekiviedlnlsagtvrhfltgerlsfk
nvgknleitvpkklletdsitlvleavee

    Sequence, based on observed residues (ATOM records): (download) 
    >1oduA (A:)
rykpdweslrehtvpkwfdkakfgifihwgiysvpgwatpdawffqnpyaewyenslrik
esptweyhvktygenfeyekfadlftaekwdpqewadlfkkagakyvipttkhhdgfclw
gtkytdfnsvkrgpkrdlvgdlakavreaglrfgvyysggldwrfttepirypedlsyir
pntyeyadyaykqvmelvdlylpdvlwndmgwpekgkedlkylfayyynkhpegsvndrw
gvphwdfktaedlpgykweftrgiglsfgynrnehmlsveqlvytlvdvvskggnlllnv
gpkgdgtipdlqkerllglgewlrkygdaiygtsvwerccaktedgteirftrkcnrifv
iflgiptgekiviedlnlsagtvrhfltgerlsfknvgknleitvpkklletdsitlvle
av

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1oduB (B:)
mismkprykpdweslrehtvpkwfdkakfgifihwgiysvpgwatptgelgkvpmdawff
qnpyaewyenslrikesptweyhvktygenfeyekfadlftaekwdpqewadlfkkagak
yvipttkhhdgfclwgtkytdfnsvkrgpkrdlvgdlakavreaglrfgvyysggldwrf
ttepirypedlsyirpntyeyadyaykqvmelvdlylpdvlwndmgwpekgkedlkylfa
yyynkhpegsvndrwgvphwdfktaeyhvnypgdlpgykweftrgiglsfgynrnegpeh
mlsveqlvytlvdvvskggnlllnvgpkgdgtipdlqkerllglgewlrkygdaiygtsv
werccaktedgteirftrkcnrifviflgiptgekiviedlnlsagtvrhfltgerlsfk
nvgknleitvpkklletdsitlvleavee

    Sequence, based on observed residues (ATOM records): (download) 
    >1oduB (B:)
rykpdweslrehtvpkwfdkakfgifihwgiysvpgwatpdawffqnpyaewyenslrik
esptweyhvktygenfeyekfadlftaekwdpqewadlfkkagakyvipttkhhdgfclw
gtkytdfnsvkrgpkrdlvgdlakavreaglrfgvyysggldwrfttepirypedlsyir
pntyeyadyaykqvmelvdlylpdvlwndmgwpekgkedlkylfayyynkhpegsvndrw
gvphwdfktaelpgykweftrgiglsfgynrnegpehmlsveqlvytlvdvvskggnlll
nvgpkgdgtipdlqkerllglgewlrkygdaiygtsvwerccaktedgteirftrkcnri
fviflgiptgekiviedlnlsagtvrhfltgerlsfknvgknleitvpkklletdsitlv
leav