PDB entry 1ob1
View 1ob1 on RCSB PDB site
Description: crystal structure of a fab complex whith plasmodium falciparum msp1-19
Class: immunoglobulin/complex
Keywords: immunoglobulin, antibody fab fragment, msp1-19, egf-like domain, surface antigen, malaria vaccine component, merozoite surface protein 1
Deposited on
2003-01-22, released
2003-05-01
The last revision prior to the SCOP 1.73 freeze date was dated
2003-05-01, with a file datestamp of
2007-06-28.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.2582
AEROSPACI score: 0.17
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: antibody, heavy chain
Species: Mus musculus
Domains in SCOP 1.73: d1ob1a1, d1ob1a2 - Chain 'B':
Compound: antibody, light chain
Species: Mus musculus
Domains in SCOP 1.73: d1ob1b1, d1ob1b2 - Chain 'C':
Compound: Merozoite surface protein 1
Species: Plasmodium falciparum, synthetic
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1ob1c1, d1ob1c2 - Chain 'D':
Compound: antibody, heavy chain
Species: Mus musculus
Domains in SCOP 1.73: d1ob1d1, d1ob1d2 - Chain 'E':
Compound: antibody, light chain
Species: Mus musculus
Domains in SCOP 1.73: d1ob1e1, d1ob1e2 - Chain 'F':
Compound: Merozoite surface protein 1
Species: Plasmodium falciparum, synthetic
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1ob1f1, d1ob1f2 - Heterogens: CAC
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1ob1A (A:)
divmtqtpaimsaflgervtmtctatsslsssylhwyqqkpgsspklwiyttsnlasgvp
srfsgsgsgtsysltissmeaedaatyychqfhhspytfgggtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrnec
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1ob1B (B:)
elqlvqsgpqlkkpgetvrisckasgytfttagiqwvqrlpgkdlkwigwinthsgvpqy
addfkgrfafsletsastaflqiinlknedtatyfcarnyyrfdggmdfwgqgtsvtvss
akttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsd
lytlsssvtvtsstwpsqsitcnvahpasstkvdkkiep
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1ob1C (C:)
nisqhqcvkkqcpqnsgcfrhldereeckcllnykqegdkcvenpnptcnennggcdada
kcteedsgsngkkitcectkpdsyplfdgifcshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1ob1C (C:)
nisqhqcvkkqcpqnsgcfrhldereeckcllnykqegdkcvenpnptcnennggcdada
kcteedsgsngkkitcectkpdsyplfdgifcshhh
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1ob1D (D:)
divmtqtpaimsaflgervtmtctatsslsssylhwyqqkpgsspklwiyttsnlasgvp
srfsgsgsgtsysltissmeaedaatyychqfhhspytfgggtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrnec
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1ob1E (E:)
elqlvqsgpqlkkpgetvrisckasgytfttagiqwvqrlpgkdlkwigwinthsgvpqy
addfkgrfafsletsastaflqiinlknedtatyfcarnyyrfdggmdfwgqgtsvtvss
akttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsd
lytlsssvtvtsstwpsqsitcnvahpasstkvdkkiep
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1ob1F (F:)
nisqhqcvkkqcpqnsgcfrhldereeckcllnykqegdkcvenpnptcnennggcdada
kcteedsgsngkkitcectkpdsyplfdgifcshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1ob1F (F:)
nisqhqcvkkqcpqnsgcfrhldereeckcllnykqegdkcvenpnptcnennggcdada
kcteedsgsngkkitcectkpdsyplfdgifcshhhh