PDB entry 1oax

View 1oax on RCSB PDB site
Description: fv structure of the ige spe-7 in complex with acenaphthenequinone
Class: immune system
Keywords: immune system, antibody/complex, antibody, allergy, ige
Deposited on 2003-01-21, released 2004-01-15
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.66 Å
R-factor: 0.238
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: immunoglobulin e
    Species: RATTUS RATTUS [TaxId:10117]
    Database cross-references and differences (RAF-indexed):
    • PDB 1OAX (0-109)
    Domains in SCOPe 2.01: d1oaxh_
  • Chain 'I':
    Compound: immunoglobulin e
    Species: RATTUS RATTUS [TaxId:10117]
    Database cross-references and differences (RAF-indexed):
    • PDB 1OAX
  • Chain 'J':
    Compound: immunoglobulin e
    Species: RATTUS RATTUS [TaxId:10117]
    Database cross-references and differences (RAF-indexed):
    • PDB 1OAX (0-109)
    Domains in SCOPe 2.01: d1oaxj_
  • Chain 'K':
    Compound: immunoglobulin e
    Species: RATTUS RATTUS [TaxId:10117]
    Database cross-references and differences (RAF-indexed):
    • PDB 1OAX
  • Chain 'L':
    Compound: immunoglobulin e
    Species: RATTUS RATTUS [TaxId:10117]
    Domains in SCOPe 2.01: d1oaxl_
  • Chain 'M':
    Compound: immunoglobulin e
    Species: RATTUS RATTUS [TaxId:10117]
    Domains in SCOPe 2.01: d1oaxm_
  • Chain 'N':
    Compound: immunoglobulin e
    Species: RATTUS RATTUS [TaxId:10117]
    Domains in SCOPe 2.01: d1oaxn_
  • Chain 'O':
    Compound: immunoglobulin e
    Species: RATTUS RATTUS [TaxId:10117]
    Domains in SCOPe 2.01: d1oaxo_
  • Heterogens: ANQ, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1oaxH (H:)
evqlqqsgaelvkpgasvklsckasgytftsywmhwvkqrpgrglewigridpngggtky
nlkfkskatltvdkpsstaymqlssltsedsavyycarmwyygtyyfdywgqgttltvss
aa

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1oaxJ (J:)
evqlqqsgaelvkpgasvklsckasgytftsywmhwvkqrpgrglewigridpngggtky
nlkfkskatltvdkpsstaymqlssltsedsavyycarmwyygtyyfdywgqgttltvss
aa

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1oaxL (L:)
qavvtqesalttspgetvtltcrsstgavttsnyanwvqekprhlftgliggtnnrapgv
parfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvlt

    Sequence, based on observed residues (ATOM records): (download) 
    >1oaxL (L:)
avvtqesalttspgetvtltcrsstgavttsnyanwvqekprhlftgliggtnnrapgvp
arfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvl

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >1oaxM (M:)
qavvtqesalttspgetvtltcrsstgavttsnyanwvqekprhlftgliggtnnrapgv
parfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvlt

    Sequence, based on observed residues (ATOM records): (download) 
    >1oaxM (M:)
avvtqesalttspgetvtltcrsstgavttsnyanwvqekprhlftgliggtnnrapgvp
arfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvl

  • Chain 'N':
    Sequence, based on SEQRES records: (download) 
    >1oaxN (N:)
qavvtqesalttspgetvtltcrsstgavttsnyanwvqekprhlftgliggtnnrapgv
parfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvlt

    Sequence, based on observed residues (ATOM records): (download) 
    >1oaxN (N:)
avvtqesalttspgetvtltcrsstgavttsnyanwvqekprhlftgliggtnnrapgvp
arfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvl

  • Chain 'O':
    Sequence, based on SEQRES records: (download) 
    >1oaxO (O:)
qavvtqesalttspgetvtltcrsstgavttsnyanwvqekprhlftgliggtnnrapgv
parfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvlt

    Sequence, based on observed residues (ATOM records): (download) 
    >1oaxO (O:)
avvtqesalttspgetvtltcrsstavttsnyanwvqekprhlftgliggtnnrapgvpa
rfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvl