PDB entry 1nwt

View 1nwt on RCSB PDB site
Description: Crystal structure of human cartilage gp39 (HC-gp39) in complex with chitopentaose
Class: signaling protein
Keywords: chitinase-like protein, rheumatoid arthritis, chitin, N-acetylglucosamine
Deposited on 2003-02-06, released 2003-08-26
The last revision prior to the SCOP 1.75 freeze date was dated 2003-09-30, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.218
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: chitinase-3 like protein 1
    Species: HOMO SAPIENS
    Gene:
    Database cross-references and differences (RAF-indexed):
    • Uniprot P36222 (0-361)
      • conflict (289)
    Domains in SCOP 1.75: d1nwta1, d1nwta2
  • Chain 'B':
    Compound: chitinase-3 like protein 1
    Species: HOMO SAPIENS
    Gene:
    Database cross-references and differences (RAF-indexed):
    • Uniprot P36222 (0-361)
      • conflict (289)
    Domains in SCOP 1.75: d1nwtb1, d1nwtb2
  • Chain 'C':
    Compound: chitinase-3 like protein 1
    Species: HOMO SAPIENS
    Gene:
    Database cross-references and differences (RAF-indexed):
    • Uniprot P36222 (0-361)
      • conflict (289)
    Domains in SCOP 1.75: d1nwtc1, d1nwtc2
  • Chain 'D':
    Compound: chitinase-3 like protein 1
    Species: HOMO SAPIENS
    Gene:
    Database cross-references and differences (RAF-indexed):
    • Uniprot P36222 (0-361)
      • conflict (289)
    Domains in SCOP 1.75: d1nwtd1, d1nwtd2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1nwtA (A:)
    yklvcyytswsqyregdgscfpdaldrflcthiiysfanisndhidtwewndvtlygmln
    tlknrnpnlktllsvggwnfgsqrfskiasntqsrrtfiksvppflrthgfdgldlawly
    pgrrdkqhfttlikemkaefikeaqpgkkqlllsaalsagkvtidssydiakisqhldfi
    simtydfhgawrgttghhsplfrgqedaspdrfsntdyavgymlrlgapasklvmgiptf
    grsftlassetgvgapisgpgipgrftkeagtlayyeicdflrgatvhrilgqqvpyatk
    gnqwvgyddqesvkskvqylkdrqlagamvwaldlddfqgsfcgqdlrfpltnaikdala
    at
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1nwtB (B:)
    yklvcyytswsqyregdgscfpdaldrflcthiiysfanisndhidtwewndvtlygmln
    tlknrnpnlktllsvggwnfgsqrfskiasntqsrrtfiksvppflrthgfdgldlawly
    pgrrdkqhfttlikemkaefikeaqpgkkqlllsaalsagkvtidssydiakisqhldfi
    simtydfhgawrgttghhsplfrgqedaspdrfsntdyavgymlrlgapasklvmgiptf
    grsftlassetgvgapisgpgipgrftkeagtlayyeicdflrgatvhrilgqqvpyatk
    gnqwvgyddqesvkskvqylkdrqlagamvwaldlddfqgsfcgqdlrfpltnaikdala
    at
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1nwtC (C:)
    yklvcyytswsqyregdgscfpdaldrflcthiiysfanisndhidtwewndvtlygmln
    tlknrnpnlktllsvggwnfgsqrfskiasntqsrrtfiksvppflrthgfdgldlawly
    pgrrdkqhfttlikemkaefikeaqpgkkqlllsaalsagkvtidssydiakisqhldfi
    simtydfhgawrgttghhsplfrgqedaspdrfsntdyavgymlrlgapasklvmgiptf
    grsftlassetgvgapisgpgipgrftkeagtlayyeicdflrgatvhrilgqqvpyatk
    gnqwvgyddqesvkskvqylkdrqlagamvwaldlddfqgsfcgqdlrfpltnaikdala
    at
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1nwtD (D:)
    yklvcyytswsqyregdgscfpdaldrflcthiiysfanisndhidtwewndvtlygmln
    tlknrnpnlktllsvggwnfgsqrfskiasntqsrrtfiksvppflrthgfdgldlawly
    pgrrdkqhfttlikemkaefikeaqpgkkqlllsaalsagkvtidssydiakisqhldfi
    simtydfhgawrgttghhsplfrgqedaspdrfsntdyavgymlrlgapasklvmgiptf
    grsftlassetgvgapisgpgipgrftkeagtlayyeicdflrgatvhrilgqqvpyatk
    gnqwvgyddqesvkskvqylkdrqlagamvwaldlddfqgsfcgqdlrfpltnaikdala
    at