PDB entry 1nqb
View 1nqb on RCSB PDB site
Description: trivalent antibody fragment
Class: immunoglobulin
Keywords: antibody fragment, multivalent antibody, diabody, domain swapping, immunoglobulin
Deposited on
1997-04-04, released
1997-08-20
The last revision prior to the SCOPe 2.07 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.187
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: single-chain antibody fragment
Species: Mus musculus [TaxId:10090]
Gene: B1-8 VH DOMAIN FUSED TO NQ11 V
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1nqba1, d1nqba2 - Chain 'C':
Compound: single-chain antibody fragment
Species: Mus musculus [TaxId:10090]
Gene: B1-8 VH DOMAIN FUSED TO NQ11 V
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1nqbc1, d1nqbc2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1nqbA (A:)
qvqlqqsgaelvkpgasvklsckasgytftsywmhwvkqrpgrglewigridpnsggtky
nekfkskatltvdkpsstaymqlssltsedsavyycarydyygssyfdywgqgttvtvss
dieltqtplslpvslgdqasiscrssqsivhsngntylewylqkpgqspklliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpytfgggtkleikraaaeqkl
iseedlngaahhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1nqbA (A:)
vqlqqsgaelvkpgasvklsckasgytftsywmhwvkqrpgrglewigridpnsggtkyn
ekfkskatltvdkpsstaymqlssltsedsavyycarydyygssyfdywgqgttvtvssd
ieltqtplslpvslgdqasiscrssqsivhsngntylewylqkpgqspklliykvsnrfs
gvpdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpytfgggtkleikr
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1nqbC (C:)
qvqlqqsgaelvkpgasvklsckasgytftsywmhwvkqrpgrglewigridpnsggtky
nekfkskatltvdkpsstaymqlssltsedsavyycarydyygssyfdywgqgttvtvss
dieltqtplslpvslgdqasiscrssqsivhsngntylewylqkpgqspklliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpytfgggtkleikraaaeqkl
iseedlngaahhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1nqbC (C:)
vqlqqsgaelvkpgasvklsckasgytftsywmhwvkqrpgrglewigridpnsggtkyn
ekfkskatltvdkpsstaymqlssltsedsavyycarydyygssyfdywgqgttvtvssd
ieltqtplslpvslgdqasiscrssqsivhsngntylewylqkpgqspklliykvsnrfs
gvpdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpytfgggtkleikr