PDB entry 1nom

View 1nom on RCSB PDB site
Description: DNA polymerase beta (pol b) (e.c.2.7.7.7), 31-kd domain; soaked in the presence of mncl2 (5 millimolar)
Class: nucleotidyltransferase
Keywords: DNA-directed DNA polymerase, DNA replication, DNA repair, nucleotidyltransferase
Deposited on 1996-04-19, released 1996-11-15
The last revision prior to the SCOP 1.75 freeze date was dated 1996-11-15, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.184
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase beta
    Species: Rattus norvegicus
    Gene: pol
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1noma1, d1noma2
  • Heterogens: MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1nomA (A:)
    irqddtsssinfltrvtgigpsaarklvdegiktledlrknedklnhhqriglkyfedfe
    kripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskq
    pkllhrvveqlqkvrfitdtlskgetkfmgvcqlpsendeneyphrridirlipkdqyyc
    gvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwry
    repkdrse
    

    Sequence, based on observed residues (ATOM records): (download)
    >1nomA (A:)
    ddtsssinfltrvtgigpsaarklvdegiktledlrknedklnhhqriglkyfedfekri
    preemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqpkl
    lhrvveqlqkvrfitdtlskgetkfmgvcqlpseneyphrridirlipkdqyycgvlyft
    gsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwryrepkdr
    se