PDB entry 1nds
View 1nds on RCSB PDB site
Description: crystallographic structure of a substrate bound blue copper nitrite reductase from alcaligenes xylosoxidans
Class: reductase
Keywords: blue copper nitrite reductase, copper protein, nitrite reduction, reductase
Deposited on
1997-01-23, released
1997-07-07
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.236
AEROSPACI score: 0.17
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: nitrite reductase
Species: Achromobacter xylosoxidans [TaxId:85698]
Database cross-references and differences (RAF-indexed):
- Uniprot P81445 (0-328)
- conflict (2)
- conflict (5)
- conflict (18)
- conflict (21-22)
- conflict (24)
- conflict (41)
- conflict (44)
- conflict (48)
- conflict (57)
- conflict (109)
- conflict (128)
- conflict (154-155)
- conflict (157-158)
- conflict (160)
- conflict (174)
- conflict (177-178)
- conflict (181)
- conflict (183)
- conflict (187)
- conflict (191)
- conflict (193)
- conflict (196)
- conflict (207)
- conflict (212)
- conflict (224-225)
- conflict (232)
- conflict (265)
- conflict (278)
- conflict (291)
- conflict (306)
- conflict (309-310)
- conflict (322)
- conflict (324)
Domains in SCOPe 2.08: d1ndsa1, d1ndsa2 - Chain 'B':
Compound: nitrite reductase
Species: Achromobacter xylosoxidans [TaxId:85698]
Database cross-references and differences (RAF-indexed):
- Uniprot P81445 (0-328)
- conflict (2)
- conflict (5)
- conflict (18)
- conflict (21-22)
- conflict (24)
- conflict (41)
- conflict (44)
- conflict (48)
- conflict (57)
- conflict (109)
- conflict (128)
- conflict (154-155)
- conflict (157-158)
- conflict (160)
- conflict (174)
- conflict (177-178)
- conflict (181)
- conflict (183)
- conflict (187)
- conflict (191)
- conflict (193)
- conflict (196)
- conflict (207)
- conflict (212)
- conflict (224-225)
- conflict (232)
- conflict (265)
- conflict (278)
- conflict (291)
- conflict (306)
- conflict (309-310)
- conflict (322)
- conflict (324)
Domains in SCOPe 2.08: d1ndsb1, d1ndsb2 - Chain 'C':
Compound: nitrite reductase
Species: Achromobacter xylosoxidans [TaxId:85698]
Database cross-references and differences (RAF-indexed):
- Uniprot P81445 (0-328)
- conflict (2)
- conflict (5)
- conflict (18)
- conflict (21-22)
- conflict (24)
- conflict (41)
- conflict (44)
- conflict (48)
- conflict (57)
- conflict (109)
- conflict (128)
- conflict (154-155)
- conflict (157-158)
- conflict (160)
- conflict (174)
- conflict (177-178)
- conflict (181)
- conflict (183)
- conflict (187)
- conflict (191)
- conflict (193)
- conflict (196)
- conflict (207)
- conflict (212)
- conflict (224-225)
- conflict (232)
- conflict (265)
- conflict (278)
- conflict (291)
- conflict (306)
- conflict (309-310)
- conflict (322)
- conflict (324)
Domains in SCOPe 2.08: d1ndsc1, d1ndsc2 - Heterogens: CU, NO2, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1ndsA (A:)
glprvavdlvapplvhphsqvaagapkvvqfrmsieekkmvadddgttaqamtfngsvpg
ptlvvhegdyieltlvnpatnsmphnvdfhaatgalggagltqvvpgqeavlrfkadrsg
tfvyhcapagmvpwhvvsgmngalmvlprdglrdaagaalaydrvytigesdlyvpkaad
gnysdypalasayadtvavmrtltpshavfngavgaltganaltaavgesvliihsqanr
dsrphligghgdwvwttgkfanppqlnmetwfipggsaaaalytfkqpgtyaylshnlie
amelgaaaqasvegqwdddlmtsvaapgpa
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1ndsB (B:)
glprvavdlvapplvhphsqvaagapkvvqfrmsieekkmvadddgttaqamtfngsvpg
ptlvvhegdyieltlvnpatnsmphnvdfhaatgalggagltqvvpgqeavlrfkadrsg
tfvyhcapagmvpwhvvsgmngalmvlprdglrdaagaalaydrvytigesdlyvpkaad
gnysdypalasayadtvavmrtltpshavfngavgaltganaltaavgesvliihsqanr
dsrphligghgdwvwttgkfanppqlnmetwfipggsaaaalytfkqpgtyaylshnlie
amelgaaaqasvegqwdddlmtsvaapgpa
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1ndsC (C:)
glprvavdlvapplvhphsqvaagapkvvqfrmsieekkmvadddgttaqamtfngsvpg
ptlvvhegdyieltlvnpatnsmphnvdfhaatgalggagltqvvpgqeavlrfkadrsg
tfvyhcapagmvpwhvvsgmngalmvlprdglrdaagaalaydrvytigesdlyvpkaad
gnysdypalasayadtvavmrtltpshavfngavgaltganaltaavgesvliihsqanr
dsrphligghgdwvwttgkfanppqlnmetwfipggsaaaalytfkqpgtyaylshnlie
amelgaaaqasvegqwdddlmtsvaapgpa